Fusion 'COL18A1'-'SNW1' in UCS
|
5'Gene |
3'Gene |
Gene Name |
COL18A1 |
SNW1 |
Chromosome |
21 |
14 |
Strand |
1 |
-1 |
Breakpoint position |
46933633 |
78189203 |
Discordant read pairs |
2 |
Junction spanning reads |
23 |
Perfect Junction spanning reads |
22 |
BLAST E value |
6.2 |
Tier |
tier4 |
Frame |
3UTR-CDS |
Centrality |
0.37432 |
SampleId |
TCGA.N6.A4VG.01A |
Validated by WGS |
NA |
Fig. The gene expression correlation between fused genes
5' Gene |
collagen type XVIII alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2195] |
3' Gene |
SNW domain containing 1 [Source:HGNC Symbol;Acc:HGNC:16696] |
Per the recommendation of the HUGO Gene Nomenclature Committee for Gene Fusion Designation, gene fusions are now annotated as "Gene A::Gene B". Please note that the nomenclature in the image below predates these recommendations.

Fig. Exon expression plot for fused genes. Expression was normalized across all exons; blue = lowest expression, red = highest expression. Line indicates where genes are connected.