Fusion 'EP400'-'SFSWAP' in HNSC
5'Gene 3'Gene
Gene Name EP400 SFSWAP
Chromosome 12 12
Strand 1 1
Breakpoint position 132476001 132281723
Discordant read pairs 17
Junction spanning reads 9
Perfect Junction spanning reads 9
BLAST E value 0.2
Tier tier1
Frame Out-of-frame
Centrality 0.36594
SampleId TCGA.CQ.7067.01A
Validated by WGS NA

Fig. The gene expression correlation between fused genes

5' Gene E1A binding protein p400 [Source:HGNC Symbol;Acc:HGNC:11958]
3' Gene splicing factor SWAP homolog [Source:HGNC Symbol;Acc:HGNC:10790]

Per the recommendation of the HUGO Gene Nomenclature Committee for Gene Fusion Designation, gene fusions are now annotated as "Gene A::Gene B". Please note that the nomenclature in the image below predates these recommendations.

Fig. Exon expression plot for fused genes. Expression was normalized across all exons; blue = lowest expression, red = highest expression. Line indicates where genes are connected.