Fusion 'CHD6'-'CCDC90A' in BRCA
5'Gene 3'Gene
Gene Name CHD6 CCDC90A
Chromosome 20 6
Strand -1 -1
Breakpoint position 40246979 13807276
Discordant read pairs 3
Junction spanning reads 11
Perfect Junction spanning reads 11
BLAST E value 0.47
Tier tier1
Frame 5UTR-CDS
Centrality 0.36031
SampleId TCGA.EW.A1PF.01A
Validated by WGS NA

Fig. The gene expression correlation between fused genes

5' Gene chromodomain helicase DNA binding protein 6 [Source:HGNC Symbol;Acc:HGNC:19057]
3' Gene NA

Per the recommendation of the HUGO Gene Nomenclature Committee for Gene Fusion Designation, gene fusions are now annotated as "Gene A::Gene B". Please note that the nomenclature in the image below predates these recommendations.


Fig. Exon expression plot for fused genes. Expression was normalized across all exons; blue = lowest expression, red = highest expression. Line indicates where genes are connected.