Fusion 'CBX1'-'SSH2' in BRCA
|
5'Gene |
3'Gene |
Gene Name |
CBX1 |
SSH2 |
Chromosome |
17 |
17 |
Strand |
-1 |
-1 |
Breakpoint position |
46178630 |
28022541 |
Discordant read pairs |
5 |
Junction spanning reads |
5 |
Perfect Junction spanning reads |
5 |
BLAST E value |
0.005 |
Tier |
tier1 |
Frame |
5UTR-CDS |
Centrality |
0.37088 |
SampleId |
TCGA.D8.A1XZ.01A |
Validated by WGS |
NA |
Fig. The gene expression correlation between fused genes
5' Gene |
chromobox 1 [Source:HGNC Symbol;Acc:HGNC:1551] |
3' Gene |
slingshot protein phosphatase 2 [Source:HGNC Symbol;Acc:HGNC:30580] |
Per the recommendation of the HUGO Gene Nomenclature Committee for Gene Fusion Designation, gene fusions are now annotated as "Gene A::Gene B". Please note that the nomenclature in the image below predates these recommendations.

Fig. Exon expression plot for fused genes. Expression was normalized across all exons; blue = lowest expression, red = highest expression. Line indicates where genes are connected.