Fusion 'CBX1'-'SSH2' in BRCA
5'Gene 3'Gene
Gene Name CBX1 SSH2
Chromosome 17 17
Strand -1 -1
Breakpoint position 46178630 28022541
Discordant read pairs 5
Junction spanning reads 5
Perfect Junction spanning reads 5
BLAST E value 0.005
Tier tier1
Frame 5UTR-CDS
Centrality 0.37088
SampleId TCGA.D8.A1XZ.01A
Validated by WGS NA

Fig. The gene expression correlation between fused genes

5' Gene chromobox 1 [Source:HGNC Symbol;Acc:HGNC:1551]
3' Gene slingshot protein phosphatase 2 [Source:HGNC Symbol;Acc:HGNC:30580]

Per the recommendation of the HUGO Gene Nomenclature Committee for Gene Fusion Designation, gene fusions are now annotated as "Gene A::Gene B". Please note that the nomenclature in the image below predates these recommendations.


Fig. Exon expression plot for fused genes. Expression was normalized across all exons; blue = lowest expression, red = highest expression. Line indicates where genes are connected.