Fusion 'SPAG17'-'PCF11' in BRCA
5'Gene 3'Gene
Gene Name SPAG17 PCF11
Chromosome 1 11
Strand -1 1
Breakpoint position 118727694 82872369
Discordant read pairs 7
Junction spanning reads 6
Perfect Junction spanning reads 6
BLAST E value 1.9
Tier tier1
Frame In-frame
Centrality -1.0
SampleId TCGA.AR.A1AU.01A
Validated by WGS NA

Fig. The gene expression correlation between fused genes

5' Gene sperm associated antigen 17 [Source:HGNC Symbol;Acc:HGNC:26620]
3' Gene PCF11 cleavage and polyadenylation factor subunit [Source:HGNC Symbol;Acc:HGNC:30097]

Per the recommendation of the HUGO Gene Nomenclature Committee for Gene Fusion Designation, gene fusions are now annotated as "Gene A::Gene B". Please note that the nomenclature in the image below predates these recommendations.


Fig. Exon expression plot for fused genes. Expression was normalized across all exons; blue = lowest expression, red = highest expression. Line indicates where genes are connected.