Fusion 'RALGPS1'-'TYRP1' in BRCA
|
5'Gene |
3'Gene |
Gene Name |
RALGPS1 |
TYRP1 |
Chromosome |
9 |
9 |
Strand |
1 |
1 |
Breakpoint position |
129728230 |
12693912 |
Discordant read pairs |
6 |
Junction spanning reads |
9 |
Perfect Junction spanning reads |
7 |
BLAST E value |
0.64 |
Tier |
tier1 |
Frame |
CDS-5UTR |
Centrality |
-1.0 |
SampleId |
TCGA.A2.A0D0.01A |
Validated by WGS |
non-validated |
Fig. The gene expression correlation between fused genes
5' Gene |
Ral GEF with PH domain and SH3 binding motif 1 [Source:HGNC Symbol;Acc:HGNC:16851] |
3' Gene |
tyrosinase related protein 1 [Source:HGNC Symbol;Acc:HGNC:12450] |
Per the recommendation of the HUGO Gene Nomenclature Committee for Gene Fusion Designation, gene fusions are now annotated as "Gene A::Gene B". Please note that the nomenclature in the image below predates these recommendations.

Fig. Exon expression plot for fused genes. Expression was normalized across all exons; blue = lowest expression, red = highest expression. Line indicates where genes are connected.