Fusion 'SDF2'-'MSI2' in BRCA
5'Gene 3'Gene
Gene Name SDF2 MSI2
Chromosome 17 17
Strand -1 1
Breakpoint position 26982305 55334459
Discordant read pairs 2
Junction spanning reads 6
Perfect Junction spanning reads 5
BLAST E value 0.11
Tier tier3
Frame Out-of-frame
Centrality -1.0
SampleId TCGA.3C.AALI.01A
Validated by WGS NA

Fig. The gene expression correlation between fused genes

5' Gene stromal cell derived factor 2 [Source:HGNC Symbol;Acc:HGNC:10675]
3' Gene musashi RNA binding protein 2 [Source:HGNC Symbol;Acc:HGNC:18585]

Per the recommendation of the HUGO Gene Nomenclature Committee for Gene Fusion Designation, gene fusions are now annotated as "Gene A::Gene B". Please note that the nomenclature in the image below predates these recommendations.


Fig. Exon expression plot for fused genes. Expression was normalized across all exons; blue = lowest expression, red = highest expression. Line indicates where genes are connected.