Searching by gene name

Cancer Type-Centric Fusions Results

Cancer Type: Tier:

Tumor type can be selected from twelve tumor types.

Cancer	TCGA SampleId	FusionPair	E-value	Tier	Frame	phosphorylation	ubiquitination	WGS
LUSC	TCGA.22.A5C4.01A	AAK1::WFDC13	0.76	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.21.1083.01A	AAMP::MARCH4	0.007	tier4	In-frame	A0 : B0	A0 : B0	non-validated
LUSC	TCGA.94.7557.01A	AASS::CADPS2	0.7	tier4	In-frame	A0 : B1	A0 : B0	NA
LUSC	TCGA.O2.A52S.01A	AATF::FTL	100.0	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.39.5028.01A	ABCA1::ZBTB26	5.8	tier3	CDS-5UTR	A1 : B0	A0 : B0	NA
LUSC	TCGA.39.5028.01A	ABCA1::ZBTB6	0.44	tier1	CDS-5UTR	A1 : B0	A0 : B0	NA
LUSC	TCGA.6A.AB49.01A	ABCA5::C17orf67	2.3	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.66.2756.01A	ABCD3::AK5	0.14	tier3	In-frame	A0 : B0	A0 : B0	non-validated
LUSC	TCGA.43.5670.01A	ABCG1::CCDC134	0.54	tier2	CDS-5UTR	A0 : B0	A0 : B0	non-validated
LUSC	TCGA.43.5670.01A	ABCG1::MEI1	2.9	tier2	In-frame	A0 : B0	A0 : B0	non-validated
LUSC	TCGA.85.7696.01A	ABHD12::ENTPD6	0.06	tier2	Out-of-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.77.7142.01A	ABHD12::KIF16B	1.4	tier1	In-frame	A0 : B1	A0 : B0	NA
LUSC	TCGA.NC.A5HK.01A	ABHD16A::LY6G6F	0.33	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.66.2755.01A	ABL1::CCBL1	1.5	tier1	CDS-5UTR	A1 : B0	A0 : B0	NA
LUSC	TCGA.66.2769.01A	ABR::GAS7	0.13	tier1	Out-of-frame	A1 : B1	A0 : B0	NA
LUSC	TCGA.18.3421.01A	AC010859.1::COL14A1	1.6	tier3	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.77.8140.01A	AC013461.1::RAPGEF4	1.1	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.85.8479.01A	AC069214.1::ACADS	0.024	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.85.8479.01A	AC069214.1::UNC119B	0.015	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.60.2719.01A	AC091153.1::CHRNE	0.36	tier1	In-frame	A0 : B0	A0 : B0	non-validated
LUSC	TCGA.56.A4BW.01A	AC093799.1::ANKIB1	0.064	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.63.A5MV.01A	AC113191.1::ST6GAL1	0.31	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.43.6143.01A	AC135352.1::GATA4	2.9	tier1	3UTR-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.43.6143.01A	AC135352.2::GATA4	2.5	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.21.1076.01A	ACAP3::CPSF3L	0.1	tier1	Out-of-frame	A0 : B0	A0 : B0	non-validated
LUSC	TCGA.96.A4JK.01A	ACAP3::DVL1	0.13	tier1	In-frame	A0 : B1	A0 : B0	NA
LUSC	TCGA.O2.A52V.01A	ACIN1::KIAA1598	0.2	tier1	Out-of-frame	A1 : B0	A1 : B0	NA
LUSC	TCGA.56.A4BX.01A	ACO2::ZC3H7B	0.049	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.43.A56U.01A	ACOT9::APOO	1.5	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.98.A53A.01A	ACOT9::APOO	1.5	tier3	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.22.A5C4.01A	ACSS1::DBNDD2	0.27	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.77.7337.01A	ACTB::CSE1L	2.9	tier3	3UTR-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.22.1005.01A	ACTN4::CATSPERG	0.22	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.63.A5MM.01A	ACTN4::EIF3K	0.18	tier1	In-frame	A1 : B0	A1 : B0	NA
LUSC	TCGA.22.5492.01A	ACTR2::TSGA10	0.53	tier1	In-frame	A1 : B1	A1 : B0	non-validated
LUSC	TCGA.21.1082.01A	ACVR2A::CASP8	0.17	tier1	Out-of-frame	A0 : B0	A0 : B0	validated
LUSC	TCGA.33.4538.01A	ADAM23::CERKL	0.72	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.77.7139.01A	ADAM9::HTRA4	1.0	tier1	Out-of-frame	A0 : B0	A0 : B0	non-validated
LUSC	TCGA.21.1076.01A	ADAM9::RNF170	0.046	tier2	In-frame	A0 : B0	A0 : B0	non-validated
LUSC	TCGA.33.4532.01A	ADAMTS17::CERS3	0.25	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.68.A59I.01A	ADAMTSL1::ERV3-1	0.78	tier3	CDS-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.22.4604.01A	ADAMTSL2::MAPKAP1	0.044	tier1	In-frame	A0 : B1	A0 : B0	NA
LUSC	TCGA.56.8626.01A	ADAT1::KARS	1.7	tier1	CDS-5UTR	A1 : B0	A0 : B0	NA
LUSC	TCGA.NC.A5HJ.01A	ADCK5::HEATR7A	0.1	tier3	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.33.4533.01A	ADCY9::PRKCB	0.052	tier1	In-frame	A0 : B1	A0 : B0	NA
LUSC	TCGA.37.4135.01A	ADD1::FAM193A	0.067	tier1	5UTR-CDS	A0 : B0	A0 : B0	validated
LUSC	TCGA.77.7140.01A	ADNP::PCIF1	0.17	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.52.7812.01A	AES::TNNT1	0.78	tier4	NA	A0 : B0	A0 : B0	non-validated
LUSC	TCGA.77.A5GH.01A	AFAP1::ABLIM2	0.3	tier2	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.46.3769.01A	AFAP1::SLC45A1	0.22	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.60.2695.01A	AFF1::PTPN13	0.83	tier3	CDS-5UTR	A1 : B0	A0 : B0	non-validated
LUSC	TCGA.98.8023.01A	AFTPH::GLYATL3	100.0	tier1	NA	A0 : B0	A0 : B0	NA
LUSC	TCGA.39.5034.01A	AGAP1::AANAT	0.034	tier4	Out-of-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.68.8250.01A	AGAP3::GRM3	1.7	tier2	Out-of-frame	A1 : B0	A0 : B0	validated
LUSC	TCGA.68.8250.01A	AGAP3::RELN	0.38	tier1	Out-of-frame	A1 : B0	A0 : B0	validated
LUSC	TCGA.43.8116.01A	AGFG1::MFF	1.1	tier1	In-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.39.5029.01A	AGRN::NOC4L	0.12	tier3	In-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.85.8276.01A	AHNAK::DPF2	0.54	tier1	Out-of-frame	A1 : B0	A1 : B0	NA
LUSC	TCGA.NC.A5HH.01A	AHNAK::NXF1	0.15	tier1	Out-of-frame	A1 : B0	A1 : B0	NA
LUSC	TCGA.66.2758.01A	AKAP13::CHD2	0.39	tier2	Out-of-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.43.7658.01A	AKAP9::CDK14	0.016	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.85.8479.01A	ALAS1::PARP3	0.061	tier3	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.85.A50Z.01A	ALDH2::LRBA	2.6	tier1	In-frame	A0 : B1	A0 : B1	NA
LUSC	TCGA.33.6737.01A	ALDH3A1::MYH9	0.15	tier1	5UTR-CDS	A0 : B1	A0 : B1	NA
LUSC	TCGA.92.7341.01A	ALDH3B2::PLA2G16	0.02	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.22.5483.01A	ALG1::SEC14L5	0.44	tier2	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.66.2754.01A	ALG12::ZBED4	1.5	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.60.2714.01A	ALKBH3::ANO3	0.35	tier2	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.56.8083.01A	ANKIB1::LMTK2	0.56	tier1	In-frame	A0 : B1	A0 : B0	NA
LUSC	TCGA.77.7141.01A	ANKRD12::EPB41L3	0.5	tier1	CDS-5UTR	A1 : B0	A0 : B0	NA
LUSC	TCGA.NK.A5D1.01A	ANKRD27::DPY19L3	0.96	tier4	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.66.2742.01A	ANKRD27::ZFP14	3.1	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.37.A5EN.01A	ANKRD27::ZNF536	0.22	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.18.3414.01A	ANKRD28::RFTN1	0.7	tier3	CDS-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.56.8083.01A	ANO1::FGF3	0.15	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.68.A59J.01A	ANO1::SLC7A8	0.72	tier1	In-frame	A0 : B1	A0 : B0	NA
LUSC	TCGA.77.7140.01A	AOAH::ELMO1	1.2	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.77.8153.01A	AP000769.1::DPF2	0.24	tier1	NA	A0 : B0	A0 : B0	NA
LUSC	TCGA.21.1071.01A	AP2A2::EPS8L2	0.15	tier1	In-frame	A0 : B1	A0 : B0	NA
LUSC	TCGA.66.2758.01A	AP2A2::PSMD13	0.093	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.58.8388.01A	AP2M1::SEC63	0.48	tier4	NA	A0 : B0	A0 : B0	NA
LUSC	TCGA.33.6737.01A	APOL2::ULK2	0.55	tier1	Out-of-frame	A0 : B1	A1 : B0	NA
LUSC	TCGA.34.5232.01A	APPL2::CIT	1.0	tier4	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.39.5037.01A	APTX::ARL5B	1.9	tier4	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.85.7697.01A	AQP3::B2M	0.067	tier3	3UTR-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.77.A5G6.01A	ARAP2::PDS5A	0.55	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.94.8491.01A	ARFGAP3::PACSIN2	0.33	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.NC.A5HJ.01A	ARHGAP15::KYNU	0.19	tier1	5UTR-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.94.8491.01A	ARHGAP42::SBF2	1.3	tier2	In-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.85.A4CN.01A	ARHGAP44::SLC13A5	0.49	tier4	Out-of-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.66.2795.01A	ARHGAP5::NUBPL	1.0	tier1	In-frame	A0 : B0	A0 : B0	non-validated
LUSC	TCGA.66.2756.01A	ARHGEF10L::PADI4	1.3	tier3	5UTR-CDS	A0 : B0	A0 : B0	validated
LUSC	TCGA.43.2576.01A	ARHGEF11::SMCP	2.3	tier1	CDS-5UTR	A1 : B0	A0 : B0	NA
LUSC	TCGA.56.7221.01A	ARHGEF18::TECR	0.02	tier1	3UTR-CDS	A0 : B0	A0 : B1	NA
LUSC	TCGA.18.4083.01A	ARID1A::NIPBL	0.075	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.66.2800.01A	ARID1B::ENPP4	0.009	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.85.7950.01A	ARID1B::TIAM2	0.014	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.94.7943.01A	ARID2::SPSB2	0.13	tier4	NA	A0 : B0	A0 : B0	non-validated
LUSC	TCGA.77.A5GH.01A	ARID4B::SOX5	0.01	tier1	In-frame	A0 : B1	A0 : B0	NA
LUSC	TCGA.21.1079.01A	ARL15::MOCS2	1.1	tier2	CDS-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.37.3792.01A	ARL16::C16orf70	0.41	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.92.8064.01A	ARL5B::NSUN6	0.56	tier2	Out-of-frame	A0 : B0	A0 : B0	non-validated
LUSC	TCGA.39.5028.01A	ARMC7::HN1	1.6	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.43.3920.01A	ART3::NUP54	0.13	tier1	Out-of-frame	A0 : B0	A0 : B0	validated
LUSC	TCGA.43.7658.01A	ART3::SLC25A13	100.0	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.L3.A524.01A	ASH1L::GON4L	0.27	tier2	5UTR-CDS	A0 : B1	A0 : B0	NA
LUSC	TCGA.90.7769.01A	ASXL2::MINPP1	0.018	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.43.8116.01A	ATE1::DNAJB12	0.76	tier1	In-frame	A0 : B1	A0 : B0	NA
LUSC	TCGA.22.5483.01A	ATF3::CDH20	0.006	tier3	CDS-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.66.2771.01A	ATG13::AMBRA1	0.074	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.98.A53B.01A	ATG5::EPHA7	0.75	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.77.A5G6.01A	ATG5::NTM	1.3	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.66.2788.01A	ATG5::SYNJ2	3.0	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.43.8116.01A	ATG7::ARMC3	1.7	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.98.A53B.01A	ATG7::RSPH3	0.16	tier1	Out-of-frame	A1 : B1	A0 : B0	NA
LUSC	TCGA.O2.A52V.01A	ATP10D::GABRA2	0.11	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.56.7823.01B	ATP11B::FXR1	0.25	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.56.A4BY.01A	ATP11B::MCF2L2	0.37	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.63.A5MV.01A	ATP11B::TPRG1	0.12	tier1	CDS-5UTR	A1 : B0	A0 : B0	NA
LUSC	TCGA.60.2711.01A	ATP13A4::NAALADL2	0.005	tier3	Out-of-frame	A0 : B1	A0 : B0	non-validated
LUSC	TCGA.21.1082.01A	ATP1B3::RNF7	2.3	tier1	In-frame	A0 : B0	A1 : B0	non-validated
LUSC	TCGA.34.5232.01A	ATP2A2::EP400	0.3	tier2	In-frame	A1 : B1	A1 : B0	NA
LUSC	TCGA.52.7812.01A	ATP2C1::COL6A6	0.44	tier1	Out-of-frame	A1 : B0	A1 : B0	validated
LUSC	TCGA.56.8622.01A	ATP2C1::MBNL1	0.33	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.94.8491.01A	ATP2C2::WFDC1	2.3	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.LA.A7SW.01A	ATP5L::UBE4A	1.2	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.39.5011.01A	ATP6V1F::C7orf58	1.6	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.66.2758.01A	ATP6V1H::RP1	0.6	tier3	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.56.8503.01A	ATRN::TNKS2	0.54	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.77.A5GH.01A	ATRX::LPAR4	0.007	tier2	CDS-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.77.8008.01A	AXIN1::TMEM207	0.19	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.98.A53A.01A	AXIN1::TMEM8A	0.039	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.56.5898.01A	B3GNT5::ALG3	0.87	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.56.5898.01A	B3GNT5::CAMK2N2	0.69	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.46.3765.01A	B4GALT1::KIAA1045	3.0	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.56.5897.01A	B4GALT4::ACSL5	0.7	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.94.7557.01A	BACH1::C21orf7	0.12	tier4	Out-of-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.22.5480.01A	BAG4::FGFR1	0.27	tier2	In-frame	A0 : B1	A0 : B0	NA
LUSC	TCGA.60.2722.01A	BAG6::TAF8	0.076	tier1	In-frame	A0 : B0	A0 : B0	non-validated
LUSC	TCGA.63.6202.01A	BAZ1A::RNF115	0.76	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.60.2709.01A	BAZ2A::PRIM1	0.46	tier1	In-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.85.A4JB.01A	BAZ2B::CYBRD1	0.11	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.63.7023.01A	BCAS3::MARCH10	0.035	tier2	In-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.46.6025.01A	BCL2L11::ACOXL	1.2	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.77.8140.01A	BCL2L13::CECR2	0.9	tier2	In-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.77.7142.01A	BCR::GNAZ	0.24	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.22.A5C4.01A	BCR::MYH11	0.012	tier1	Out-of-frame	A0 : B1	A0 : B0	NA
LUSC	TCGA.43.8115.01A	BIRC6::YIPF4	1.2	tier1	In-frame	A1 : B0	A1 : B0	NA
LUSC	TCGA.85.8664.01A	BMP7::PIGU	0.81	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.63.6202.01A	BMPR2::ATG4B	100.0	tier3	In-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.22.1002.01A	BRAF::SLC26A4	0.43	tier3	In-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.18.4083.01A	BRAP::C12orf24	0.054	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.77.7138.01A	BRD9::CBFB	0.02	tier1	In-frame	A0 : B1	A0 : B0	NA
LUSC	TCGA.90.6837.01A	BRD9::CEP72	2.4	tier1	In-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.60.2721.01A	BSDC1::HDAC1	1.2	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.66.2758.01A	BTBD1::MRPL46	100.0	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.LA.A7SW.01A	BTBD10::PTH	100.0	tier1	5UTR-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.98.8021.01A	BTBD3::MACF1	1.2	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
LUSC	TCGA.O2.A5IB.01A	BUB1B::PCM1	0.098	tier1	Out-of-frame	A1 : B0	A1 : B0	NA
LUSC	TCGA.22.5472.01A	C10orf11::ADK	100.0	tier4	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.85.8070.01A	C10orf118::GFRA1	0.058	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.85.8582.01A	C11orf80::PPP6R3	5.2	tier4	5UTR-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.94.7557.01A	C11orf84::BUB1B	0.94	tier2	Out-of-frame	A1 : B1	A0 : B1	NA
LUSC	TCGA.34.5232.01A	C12orf34::MSI1	0.35	tier4	5UTR-CDS	A0 : B1	A0 : B0	NA
LUSC	TCGA.85.8584.01A	C12orf35::ITPR2	0.19	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.77.A5GB.01B	C12orf5::PRR4	100.0	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.34.5232.01A	C12orf51::PEBP1	0.27	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.NC.A5HJ.01A	C12orf65::SLC11A2	0.045	tier3	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.22.1017.01A	C14orf101::MLIP	0.87	tier1	Out-of-frame	A0 : B1	A0 : B0	NA
LUSC	TCGA.58.A46J.01A	C15orf41::FAM189A1	1.5	tier3	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.94.7943.01A	C17orf63::DHRS13	0.3	tier4	In-frame	A0 : B0	A0 : B0	non-validated
LUSC	TCGA.56.5897.01A	C17orf70::NPLOC4	0.7	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.77.8138.01A	C18orf45::NPC1	0.5	tier2	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.21.1081.01A	C19orf48::ACPT	0.96	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.77.8140.01A	C19orf6::SBNO2	0.039	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.66.2790.01A	C1orf196::FGF12	0.042	tier1	NA	A0 : B0	A0 : B0	NA
LUSC	TCGA.66.2800.01A	C1QL1::SLC16A5	0.11	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.85.7696.01A	C2orf76::ACOXL	1.3	tier4	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.22.4591.01A	C3orf21::TPRG1	0.53	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.58.A46L.01A	C3orf52::CD86	0.76	tier2	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.39.5019.01A	C3orf55::CHRD	0.65	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.43.A475.01A	C6orf186::BYSL	0.08	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.18.3415.01A	C6orf62::FAM65B	0.019	tier1	In-frame	A0 : B0	A0 : B0	validated
LUSC	TCGA.77.8145.01A	C9orf3::WDR53	0.17	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.98.A53A.01A	CAMK2D::ANK2	0.87	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.NC.A5HM.01A	CAMSAP1::UBAC1	0.51	tier1	In-frame	A0 : B0	A0 : B1	NA
LUSC	TCGA.43.8115.01A	CAMSAP1L1::CARS	0.73	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.46.3769.01A	CAMTA1::DHRS3	0.12	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.66.2737.01A	CAPN1::EIF2AK2	0.32	tier4	NA	A0 : B0	A0 : B0	NA
LUSC	TCGA.NC.A5HJ.01A	CAPN13::GALNT14	0.075	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.66.2737.01A	CARM1::C19orf38	0.4	tier4	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.43.6771.01A	CARM1::OLFM2	0.68	tier2	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.43.2578.01A	CARS::OSBPL5	0.032	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.L3.A524.01A	CASC3::ERBB2	0.24	tier2	CDS-5UTR	A1 : B0	A0 : B0	NA
LUSC	TCGA.56.A4BX.01A	CBLC::PVR	0.092	tier1	3UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.96.7544.01A	CCDC127::SDHA	0.003	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.21.A5DI.01A	CCDC57::CSNK1D	0.11	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.66.2758.01A	CCDC88B::AKR1C1	0.59	tier1	CDS-5UTR	A1 : B0	A0 : B0	NA
LUSC	TCGA.43.5670.01A	CCDC88B::C11orf20	0.16	tier4	Out-of-frame	A0 : B0	A0 : B0	non-validated
LUSC	TCGA.22.4595.01A	CCDC91::PDZRN4	0.33	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.34.5241.01A	CCDC97::SIPA1L3	0.27	tier1	CDS-5UTR	A1 : B0	A0 : B0	NA
LUSC	TCGA.NC.A5HJ.01A	CCND3::TRERF1	0.19	tier1	5UTR-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.92.8063.01A	CCND3::VPS52	0.28	tier2	5UTR-CDS	A0 : B1	A0 : B0	NA
LUSC	TCGA.85.8351.01A	CCNI::MRPL1	0.51	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.37.4130.01A	CCNY::CREM	0.37	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.22.A5C4.01A	CCNY::VWA3B	0.18	tier1	In-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.NC.A5HQ.01A	CCT2::FRS2	0.044	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.85.6560.01A	CCT7::UTRN	0.26	tier3	NA	A0 : B0	A0 : B0	NA
LUSC	TCGA.66.2756.01A	CDC25A::SPINK8	0.2	tier1	In-frame	A0 : B0	A0 : B0	validated
LUSC	TCGA.NC.A5HI.01A	CDC42BPB::ZFYVE1	0.31	tier1	In-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.43.8115.01A	CDC42EP4::SDK2	0.008	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.66.2782.01A	CDC42EP4::SEPT10	1.2	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.98.A538.01A	CDCA4::C14orf79	0.22	tier1	3UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.33.4587.01A	CDKAL1::ASH1L	0.4	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.56.8307.01A	CDKAL1::CLCN4	2.7	tier1	5UTR-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.60.2715.01A	CDKN2A::SRGAP2	0.021	tier1	NA	A0 : B0	A0 : B0	NA
LUSC	TCGA.66.2800.01A	CDR2L::KSR1	0.8	tier3	CDS-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.43.7657.01A	CELF1::CHMP4B	1.6	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.43.6771.01A	CELF1::MTCH2	0.71	tier1	Out-of-frame	A0 : B1	A0 : B0	NA
LUSC	TCGA.63.A5MT.01A	CELF1::PTPMT1	0.44	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.46.6025.01A	CELSR1::SEZ6L	0.22	tier1	In-frame	A0 : B1	A0 : B0	NA
LUSC	TCGA.56.A4BY.01A	CELSR2::FAR1	0.63	tier4	NA	A0 : B0	A0 : B0	NA
LUSC	TCGA.58.8392.01A	CENPP::PTPRD	0.91	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.85.6798.01A	CENPQ::MUT	0.8	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.J1.A4AH.01A	CEP192::AFG3L2	0.26	tier1	Out-of-frame	A1 : B0	A1 : B0	NA
LUSC	TCGA.85.8277.01A	CEP72::AHRR	0.49	tier3	Out-of-frame	A0 : B0	A0 : B0	non-validated
LUSC	TCGA.NC.A5HD.01A	CHEK2::C22orf31	100.0	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.46.3765.01A	CHRM3::CASQ1	0.17	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.85.8071.01A	CHST9::DLGAP3	0.31	tier2	CDS-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.70.6723.01A	CHST9::ZNF675	0.61	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.34.8456.01A	CHSY1::PCSK6	2.4	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.66.2782.01A	CISD1::GABRA1	0.38	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.34.5232.01A	CIT::C12orf34	0.29	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.NC.A5HK.01A	CLCF1::PPP1CA	0.11	tier1	In-frame	A0 : B1	A0 : B1	NA
LUSC	TCGA.56.8307.01A	CLCN4::TFAP2A	0.8	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.22.5478.01A	CLOCK::SRD5A3	0.02	tier4	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.94.7943.01A	CLPB::FCHSD2	0.012	tier1	In-frame	A0 : B0	A0 : B0	non-validated
LUSC	TCGA.66.2771.01A	CLPTM1::CEACAM16	0.011	tier4	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.NK.A5D1.01A	CLPTM1::OPA3	0.69	tier3	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.77.A5GH.01A	CLYBL::UBAC2	0.042	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.39.5029.01A	CMAHP::LRRC16A	6.2	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.22.1016.01A	CMBL::DARS2	1.0	tier1	5UTR-CDS	A0 : B0	A0 : B0	non-validated
LUSC	TCGA.77.8143.01A	CNN2::TTC7A	0.45	tier3	NA	A0 : B0	A0 : B0	NA
LUSC	TCGA.98.A539.01A	CNOT1::GOT2	0.72	tier4	5UTR-CDS	A0 : B1	A0 : B0	NA
LUSC	TCGA.66.2781.01A	CNTN5::TTYH1	1.6	tier2	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.56.8629.01A	COBLL1::NUDT15	0.19	tier3	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.22.5485.01A	COBLL1::SCN3A	0.88	tier1	CDS-5UTR	A1 : B0	A0 : B0	non-validated
LUSC	TCGA.18.3415.01A	COBLL1::SLC38A11	0.1	tier4	Out-of-frame	A0 : B0	A0 : B0	non-validated
LUSC	TCGA.22.5474.01A	COBLL1::SMYD3	0.042	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.85.8071.01A	COL17A1::WDR96	0.31	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.52.7810.01A	COL21A1::DST	0.089	tier2	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.77.A5GH.01A	COL4A5::RNF128	0.19	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.43.3920.01A	COL4A5::XRCC4	1.4	tier3	Out-of-frame	A0 : B0	A0 : B0	non-validated
LUSC	TCGA.56.8201.01A	COL5A1::UVRAG	1.2	tier3	3UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.85.8666.01A	COL6A1::EIF2AK2	5.3	tier3	NA	A0 : B0	A0 : B0	NA
LUSC	TCGA.NC.A5HM.01A	COX7B2::PIP4K2A	0.082	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
LUSC	TCGA.85.A513.01A	CPSF6::CCNL2	0.22	tier1	3UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.94.A5I6.01A	CPT1A::LPXN	4.3	tier1	Out-of-frame	A0 : B1	A0 : B0	NA
LUSC	TCGA.60.2714.01A	CREBBP::HCN1	0.17	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.NC.A5HN.01A	CREBBP::NAA60	0.084	tier4	CDS-5UTR	A1 : B0	A0 : B0	NA
LUSC	TCGA.33.4587.01A	CREBBP::PRSS33	0.053	tier1	In-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.85.A4CN.01A	CRK::STX8	1.6	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.22.5478.01A	CRTC1::LYPD4	0.5	tier4	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.22.5489.01A	CRYBG3::IL20RB	4.2	tier1	In-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.63.5131.01A	CSMD1::C15orf41	0.32	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.66.2783.01A	CSNK1D::SCPEP1	1.7	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.92.8065.01A	CSTA::CASR	1.8	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.LA.A7SW.01A	CTCF::E2F4	1.0	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.43.5670.01A	CTIF::MOCOS	1.3	tier2	5UTR-CDS	A0 : B0	A0 : B0	non-validated
LUSC	TCGA.56.6546.01A	CTIF::PSTPIP2	0.18	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.L3.A524.01A	CTNNB1::TCOF1	0.2	tier4	3UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.56.7730.01A	CTNNBIP1::UBE4B	0.014	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.68.8251.01A	CTNND1::GYLTL1B	0.59	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.94.7033.01A	CTTN::DSG1	0.59	tier4	In-frame	A0 : B1	A0 : B0	NA
LUSC	TCGA.39.5035.01A	CTU2::ZC3H18	0.019	tier4	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.O2.A52V.01A	CUL3::SPAG16	0.15	tier1	In-frame	A0 : B1	A0 : B0	NA
LUSC	TCGA.22.5480.01A	CUX1::AHCYL2	2.5	tier1	In-frame	A1 : B1	A0 : B0	NA
LUSC	TCGA.37.4132.01A	CUX1::EHBP1L1	0.06	tier2	In-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.43.7657.01A	CWF19L2::AMICA1	0.23	tier3	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.85.7950.01A	CXCL13::UTRN	0.53	tier3	NA	A0 : B0	A0 : B0	NA
LUSC	TCGA.66.2756.01A	CYTIP::MGAT5	0.054	tier1	5UTR-CDS	A0 : B1	A0 : B0	validated
LUSC	TCGA.85.8070.01A	DAPP1::SLC4A4	0.005	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.77.8009.01A	DCAF10::PAX5	0.68	tier1	Out-of-frame	A0 : B1	A0 : B0	NA
LUSC	TCGA.52.7810.01A	DCAF15::C19orf57	0.2	tier4	Out-of-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.18.3417.01A	DCAF8::NME7	0.83	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.92.7341.01A	DCBLD2::ABI3BP	0.01	tier1	In-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.60.2704.01A	DCBLD2::KALRN	0.056	tier2	Out-of-frame	A1 : B0	A1 : B0	NA
LUSC	TCGA.85.6175.01A	DCTN2::DDX23	0.72	tier1	In-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.85.7698.01A	DDHD2::PPAPDC1B	0.38	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.34.5241.01A	DDIT4::EIF2AK2	0.051	tier3	NA	A0 : B0	A0 : B0	NA
LUSC	TCGA.85.7710.01A	DENND1A::RRAGB	4.5	tier1	Out-of-frame	A1 : B1	A0 : B0	NA
LUSC	TCGA.18.3407.01A	DENND1B::RGL1	4.4	tier2	CDS-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.77.8009.01A	DEPTOR::SAMD12	0.81	tier2	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.46.3765.01A	DGCR8::CRKL	0.25	tier4	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.22.1017.01A	DGKD::ATG16L1	0.76	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.43.2581.01A	DGKE::EPN3	3.9	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.NC.A5HL.01A	DGUOK::STAMBP	0.006	tier1	CDS-3UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.98.A53C.01A	DHCR24::SFTPC	0.55	tier4	3UTR-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.39.5019.01A	DHRS1::METTL3	0.36	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.77.8148.01A	DICER1::PAPOLA	0.48	tier3	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.66.2800.01A	DIP2B::LARP4	2.0	tier1	Out-of-frame	A1 : B0	A1 : B0	NA
LUSC	TCGA.60.2721.01A	DIP2C::ZMYND11	0.35	tier4	CDS-5UTR	A1 : B0	A0 : B0	NA
LUSC	TCGA.18.3411.01A	DIS3L2::FAM124B	1.1	tier1	CDS-3UTR	A1 : B0	A0 : B0	NA
LUSC	TCGA.66.2756.01A	DISP2::PHGR1	0.002	tier1	Out-of-frame	A1 : B0	A0 : B0	validated
LUSC	TCGA.66.2771.01A	DLG1::BDH1	2.2	tier1	CDS-5UTR	A1 : B0	A0 : B0	NA
LUSC	TCGA.85.7697.01A	DLG5::POLR3A	0.003	tier3	Out-of-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.22.4594.01A	DMTF1::GRM3	2.4	tier3	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.85.8351.01A	DNAJC2::CDK14	0.004	tier3	In-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.21.1080.01A	DNAJC2::SLC26A5	0.29	tier2	Out-of-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.60.2720.01A	DNMBP::TPTE2	0.41	tier2	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.85.7696.01A	DNPEP::TNKS	0.24	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.37.A5EN.01A	DOPEY2::PIBF1	0.86	tier3	Out-of-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.52.7810.01A	DPF2::CDC42EP2	0.21	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.21.5787.01A	DPY19L1::CDKAL1	0.57	tier2	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.96.A4JK.01A	DPYSL2::BNIP3L	2.1	tier1	NA	A0 : B0	A0 : B0	NA
LUSC	TCGA.33.4532.01A	DRG1::MYO18B	0.53	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.56.7822.01A	DST::AKAP6	0.051	tier1	In-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.60.2711.01A	DST::TRIM38	0.066	tier1	CDS-5UTR	A1 : B0	A0 : B0	non-validated
LUSC	TCGA.52.7812.01A	DSTN::ARPC5	0.13	tier1	In-frame	A0 : B0	A0 : B0	non-validated
LUSC	TCGA.33.AAS8.01A	DTD1::TASP1	0.4	tier1	CDS-3UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.46.3765.01A	DUSP12::CR2	0.66	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.O2.A52S.01A	DUSP14::ATP6V0A1	2.8	tier1	5UTR-CDS	A0 : B1	A0 : B1	NA
LUSC	TCGA.98.A53H.01A	DYNC1H1::CDHR3	0.078	tier4	3UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.56.8629.01A	DYNC1H1::EIF5	0.85	tier1	3UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.43.7658.01A	DYNC1I1::CXCL11	0.59	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.60.2695.01A	ECD::TTC18	0.42	tier1	5UTR-CDS	A0 : B0	A0 : B0	non-validated
LUSC	TCGA.56.5898.01A	ECE2::HTR3C	0.21	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.77.8145.01A	ECT2::DGKG	0.074	tier2	CDS-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.60.2710.01A	ECT2::KALRN	0.14	tier1	In-frame	A0 : B1	A0 : B0	NA
LUSC	TCGA.77.6845.01A	EEF2K::C10orf35	2.4	tier1	5UTR-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.66.2771.01A	EFNA3::FLAD1	0.58	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.66.2771.01A	EFNA4::FLAD1	0.41	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.52.7809.01A	EFR3B::NCAN	0.028	tier3	5UTR-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.21.1072.01A	EFTUD1::KHDRBS2	0.077	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.85.8351.01A	EGFR::TEAD2	0.07	tier1	In-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.43.8115.01A	EGLN1::PTPRF	0.046	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.66.2759.01A	EGLN2::PLD3	0.17	tier1	In-frame	A0 : B0	A0 : B0	non-validated
LUSC	TCGA.56.8623.01A	EGR1::FAR1	7.9	tier3	NA	A0 : B0	A0 : B0	NA
LUSC	TCGA.63.A5MR.01A	EHBP1::COMMD1	2.0	tier1	In-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.NC.A5HN.01A	EHBP1::VAV2	0.94	tier1	In-frame	A0 : B1	A0 : B0	NA
LUSC	TCGA.60.2713.01A	EIF2C2::PTK2	7.7	tier1	Out-of-frame	A0 : B0	A0 : B0	non-validated
LUSC	TCGA.LA.A7SW.01A	EIF2S2::ADRA1D	0.021	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.77.7338.01A	EIF3K::PPP2R2A	1.7	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.63.6202.01A	EIF4G2::UTRN	0.14	tier3	NA	A0 : B0	A0 : B0	NA
LUSC	TCGA.85.8580.01A	EIF4G3::ECE1	0.093	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
LUSC	TCGA.56.7579.01A	ELF2::ICA1L	2.3	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.60.2706.01A	ELL::CRLF1	0.26	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.85.A53L.01A	ELL::LDLRAD1	1.4	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.77.6842.01A	ELMO1::SCIN	0.45	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.33.4589.01A	ELOVL5::SLC25A27	0.093	tier2	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.63.A5ML.01A	EML1::ADAMDEC1	0.11	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.77.A5G6.01A	EML1::TTLL5	0.062	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.77.8143.01A	EML4::COX7A2L	0.6	tier1	NA	A0 : B0	A0 : B0	NA
LUSC	TCGA.39.5029.01A	ENAH::AEBP2	0.93	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.85.8287.01A	ENGASE::RBFOX3	0.002	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.77.8009.01A	ENO1::UVRAG	0.006	tier3	3UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.34.5929.01A	EP300::TTC28	0.33	tier3	Out-of-frame	A1 : B1	A0 : B0	NA
LUSC	TCGA.98.A538.01A	EPB41L1::C20orf152	0.17	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.66.2788.01A	EPB41L2::LAMA2	0.46	tier2	In-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.33.4586.01A	EPB41L3::LRRC34	3.9	tier2	Out-of-frame	A1 : B0	A0 : B0	non-validated
LUSC	TCGA.22.4594.01A	EPG5::ST8SIA5	0.1	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.34.5236.01A	EPHA4::COL4A3	1.8	tier3	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.33.4547.01A	EPN1::U2AF2	0.027	tier1	In-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.56.6545.01A	EPS15L1::ZNF473	0.51	tier1	Out-of-frame	A1 : B0	A1 : B0	NA
LUSC	TCGA.56.A4BY.01A	ERBB2::TCAP	0.002	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.98.A53A.01A	ERBB3::SUOX	0.6	tier4	CDS-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.56.8622.01A	ERC1::MRPL51	0.031	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.33.6737.01A	ERGIC1::RANBP17	0.65	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.33.6738.01A	ERGIC1::RANBP17	0.65	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.94.7943.01A	ERICH1::IYD	0.28	tier1	In-frame	A0 : B0	A0 : B0	non-validated
LUSC	TCGA.6A.AB49.01A	ERMP1::RBBP8	0.18	tier1	In-frame	A0 : B1	A0 : B0	NA
LUSC	TCGA.66.2766.01A	ESCO1::LAMA3	0.51	tier1	In-frame	A0 : B0	A0 : B0	non-validated
LUSC	TCGA.66.2788.01A	ESR1::TFB1M	1.1	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.66.2758.01A	ETHE1::CADM4	0.9	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.77.8143.01A	ETNK1::CMAS	0.041	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.46.3765.01A	EXD3::PNPLA7	0.012	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.O2.A5IB.01A	EXOSC7::ZDHHC3	1.5	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.L3.A524.01A	EXT1::SAMD12	0.75	tier4	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.85.8354.01A	EXT2::PRMT10	1.5	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.34.5928.01A	EZH2::AUTS2	0.58	tier1	Out-of-frame	A1 : B1	A0 : B0	NA
LUSC	TCGA.85.8355.01A	FAF1::OSBPL9	0.6	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.43.2581.01A	FAM100B::TIMP2	0.21	tier2	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.77.8146.01A	FAM104A::CDC42EP4	1.1	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.98.A53A.01A	FAM104A::CDC42EP4	1.1	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.21.1070.01A	FAM114A1::EEPD1	2.4	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.43.2576.01A	FAM155A::FGF14	0.88	tier2	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.94.7557.01A	FAM168A::TMEM135	1.0	tier4	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.90.A4EE.01A	FAM174B::LRRC49	3.4	tier2	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.46.3768.01A	FAM190A::MMRN1	1.1	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
LUSC	TCGA.21.1082.01A	FAM193A::TNIP2	1.2	tier1	Out-of-frame	A0 : B0	A0 : B0	non-validated
LUSC	TCGA.92.7340.01A	FAM59A::FAM38B	0.016	tier3	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.39.5011.01A	FAM60A::C7orf44	0.96	tier1	5UTR-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.85.A4CN.01A	FAM83B::COL21A1	0.49	tier3	In-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.LA.A7SW.01A	FAM98C::BLVRB	0.13	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.60.2709.01A	FARP1::GPC6	0.13	tier4	Out-of-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.63.A5MJ.01A	FAT1::IRF2	0.35	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.85.8071.01A	FAT2::ATOX1	0.19	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.34.5232.01A	FBRSL1::CKAP4	0.05	tier1	NA	A0 : B0	A0 : B0	NA
LUSC	TCGA.60.2715.01A	FBXL20::GRB7	0.82	tier3	CDS-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.22.0944.01A	FBXL20::GSDMB	2.1	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.22.0944.01A	FBXL20::ORMDL3	0.24	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.33.4587.01A	FBXO42::C19orf26	2.0	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.60.2714.01A	FBXW7::INPP4B	1.2	tier2	CDS-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.56.A4BY.01A	FBXW7::TMEM154	0.003	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.51.6867.01A	FGF12::LRRC15	0.18	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.66.2767.01A	FGF3::LGR4	0.16	tier2	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.66.2765.01A	FGFR2::KIAA1967	0.23	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.22.4607.01A	FGFR3::TACC3	0.12	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.34.2608.01A	FGFR3::TACC3	0.12	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.39.5024.01A	FGFR3::TACC3	0.12	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.63.7022.01A	FGFR3::TACC3	0.12	tier3	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.66.2786.01A	FGFR3::TACC3	0.12	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.92.8065.01A	FGFR3::TACC3	0.12	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.63.A5MR.01A	FHOD3::GALNT1	0.68	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.NC.A5HH.01A	FLNA::MTCP1NB	1.2	tier1	5UTR-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.37.4130.01A	FN1::PECR	2.0	tier1	In-frame	A0 : B1	A0 : B0	NA
LUSC	TCGA.85.7950.01A	FN1::UTRN	0.32	tier3	NA	A0 : B0	A0 : B0	NA
LUSC	TCGA.96.7544.01A	FNBP4::PVRL1	0.24	tier1	In-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.21.1077.01A	FNDC3B::NAALADL2	0.4	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
LUSC	TCGA.51.6867.01A	FNDC3B::SLC7A14	0.41	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.46.6025.01A	FNDC3B::SPATA16	0.049	tier3	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.66.2771.01A	FOSL2::BRE	0.036	tier1	CDS-3UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.85.8584.01A	FOXJ2::LPCAT3	0.45	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.60.2715.01A	FOXN2::SPTBN1	1.8	tier1	In-frame	A0 : B1	A0 : B1	NA
LUSC	TCGA.56.7730.01A	FOXN3::RP11-944C7.1	1.4	tier2	NA	A0 : B0	A0 : B0	NA
LUSC	TCGA.60.2706.01A	FOXO1::ELF1	0.06	tier1	In-frame	A0 : B1	A0 : B0	NA
LUSC	TCGA.66.2756.01A	FRAS1::MRPL1	0.19	tier1	In-frame	A0 : B0	A0 : B0	non-validated
LUSC	TCGA.66.2785.01A	FRMD4B::PPP2R3A	0.009	tier2	In-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.21.5786.01A	FRYL::LCORL	0.6	tier4	Out-of-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.63.A5MV.01A	FXR1::FGF10	3.1	tier1	NA	A0 : B0	A0 : B0	NA
LUSC	TCGA.85.8580.01A	FXR1::MCCC1	3.9	tier1	In-frame	A1 : B1	A0 : B0	NA
LUSC	TCGA.39.5019.01A	FZR1::CNN1	0.2	tier2	In-frame	A1 : B1	A0 : B0	NA
LUSC	TCGA.85.A50M.01A	G3BP1::PCDH9	0.19	tier1	Out-of-frame	A1 : B0	A1 : B0	NA
LUSC	TCGA.94.8491.01A	G3BP1::SLC36A1	0.61	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.22.5489.01A	GABRG3::OCA2	0.79	tier4	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.34.A5IX.01A	GALNTL4::ST5	4.9	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.18.3412.01A	GAN::GRM7	0.71	tier4	Out-of-frame	A1 : B1	A0 : B0	NA
LUSC	TCGA.37.4130.01A	GART::PCP4	0.081	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.68.A59I.01A	GATS::TSC22D4	0.005	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.21.A5DI.01A	GBAS::PSPH	0.044	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.43.2578.01A	GBE1::ZNF385D	0.55	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.22.1017.01A	GCN1L1::CCND2	0.16	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.98.A53B.01A	GDNF::FYB	0.64	tier3	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.37.3789.01A	GFPT1::NFU1	0.13	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.94.8491.01A	GIGYF2::EFHD1	2.2	tier3	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.43.2578.01A	GLG1::CFDP1	0.12	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.77.7465.01A	GLI3::CROT	3.2	tier1	CDS-5UTR	A1 : B0	A0 : B0	NA
LUSC	TCGA.77.8009.01A	GLT25D1::PTN	0.21	tier4	3UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.66.2766.01A	GMPS::C3orf55	0.99	tier1	CDS-5UTR	A1 : B0	A1 : B0	non-validated
LUSC	TCGA.60.2722.01A	GNA13::C9orf93	0.42	tier3	In-frame	A0 : B0	A0 : B0	non-validated
LUSC	TCGA.33.6738.01A	GNA13::CEP112	0.79	tier3	In-frame	A0 : B1	A0 : B0	NA
LUSC	TCGA.85.8664.01A	GNAS::SUPT16H	0.62	tier3	3UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.34.8454.01A	GNB1::CALML6	1.5	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.NC.A5HK.01A	GNB1L::TXNRD2	0.75	tier4	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.56.A49D.01A	GNE::ROCK1	0.36	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.33.AASB.01A	GNL3::MANF	0.29	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.33.6738.01A	GOLGA3::CHFR	0.007	tier3	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.52.7622.01A	GOLIM4::RNF175	0.041	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.18.3416.01A	GOLPH3::LRTM1	0.48	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.77.A5GH.01A	GOLT1B::IAPP	2.6	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.LA.A7SW.01A	GON4L::C1orf61	0.83	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.NC.A5HJ.01A	GON4L::MEX3A	1.6	tier4	In-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.66.2789.01A	GPC1::ANKFN1	1.1	tier1	Out-of-frame	A0 : B0	A0 : B0	validated
LUSC	TCGA.46.6025.01A	GPC1::MFN1	2.4	tier3	NA	A0 : B0	A0 : B0	NA
LUSC	TCGA.85.A53L.01A	GPHN::DCAF5	0.91	tier1	In-frame	A1 : B1	A0 : B0	NA
LUSC	TCGA.98.8021.01A	GPNMB::IRF6	0.13	tier3	3UTR-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.46.3769.01A	GPR146::DTNBP1	0.47	tier2	NA	A0 : B0	A0 : B0	NA
LUSC	TCGA.46.6025.01A	GRB2::TCTEX1D2	0.31	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.85.8354.01A	GRIP1::XCL1	3.1	tier2	Out-of-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.21.1076.01A	GSN::UTRN	0.38	tier3	NA	A0 : B0	A0 : B0	non-validated
LUSC	TCGA.56.A4BX.01A	GTF2F2::KIAA1704	0.2	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.56.A4BX.01A	GTF2F2::RSF1	0.004	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.52.7810.01A	GTSE1::TTC38	0.29	tier4	Out-of-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.85.8048.01A	GZMM::HNRNPM	0.3	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.O2.A52N.01A	HARS::TMCO6	0.82	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.LA.A446.01A	HCFC1::EPHA5	9.2	tier2	Out-of-frame	A1 : B0	A1 : B0	NA
LUSC	TCGA.66.2766.01A	HCK::C20orf160	0.017	tier1	5UTR-CDS	A0 : B0	A0 : B0	non-validated
LUSC	TCGA.68.A59I.01A	HDAC9::C8orf34	0.014	tier3	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.66.2785.01A	HEATR7A::TCTEX1D2	0.43	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.77.A5GH.01A	HEG1::SLC12A8	0.008	tier3	In-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.77.8139.01A	HERC1::USP3	0.031	tier4	CDS-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.L3.A524.01A	HEXA::BBS4	0.069	tier2	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.37.3792.01A	HGS::GNAO1	0.097	tier1	Out-of-frame	A1 : B0	A1 : B0	NA
LUSC	TCGA.63.7022.01A	HGSNAT::AGPAT6	0.34	tier3	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.34.5236.01A	HHAT::PPPDE1	6.6	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.77.7139.01A	HIAT1::PALMD	0.25	tier1	In-frame	A0 : B0	A0 : B0	non-validated
LUSC	TCGA.56.8083.01A	HIBCH::INPP1	0.19	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.96.7544.01A	HIBCH::MFSD6	1.5	tier2	CDS-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.22.1002.01A	HIF1A::RP11-47I22.3	0.18	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.6A.AB49.01A	HIF1A::RP11-47I22.3	0.18	tier3	Out-of-frame	A1 : B0	A1 : B0	NA
LUSC	TCGA.37.A5EN.01A	HIF1A::RP11-47I22.4	1.3	tier4	NA	A0 : B0	A0 : B0	NA
LUSC	TCGA.39.5011.01A	HIPK2::GRM8	0.18	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.43.6771.01A	HIPK3::GYLTL1B	0.67	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.77.7140.01A	HMG20A::RCN2	0.091	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
LUSC	TCGA.22.0944.01A	HNRNPA2B1::DSP	0.11	tier4	3UTR-CDS	A0 : B1	A0 : B0	NA
LUSC	TCGA.94.8035.01A	HNRNPR::E2F2	0.5	tier1	In-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.18.3415.01A	HOOK2::RTBDN	0.67	tier4	Out-of-frame	A1 : B0	A0 : B0	validated
LUSC	TCGA.66.2758.01A	HSP90AA1::RAGE	0.069	tier1	Out-of-frame	A1 : B0	A1 : B0	NA
LUSC	TCGA.98.A53I.01A	HSPB1::SF3B2	0.36	tier4	3UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.98.7454.01A	HTT::GRK4	0.3	tier1	In-frame	A1 : B0	A1 : B0	NA
LUSC	TCGA.77.7338.01A	ICAM1::HNRNPM	0.3	tier1	In-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.66.2759.01A	IFT74::WNK2	7.3	tier1	In-frame	A1 : B0	A0 : B0	non-validated
LUSC	TCGA.33.4587.01A	IGF2BP3::PRKCA	0.86	tier2	In-frame	A0 : B1	A0 : B1	NA
LUSC	TCGA.66.2800.01A	IGF2R::SYTL3	2.6	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.46.3767.01A	IGFBP4::UTRN	0.97	tier3	NA	A0 : B0	A0 : B0	NA
LUSC	TCGA.85.7698.01A	IGSF3::PARL	1.3	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.96.8170.01A	IKBKB::ANK1	0.076	tier1	In-frame	A1 : B1	A0 : B0	NA
LUSC	TCGA.22.A5C4.01A	IL17RA::SCARF2	0.3	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.98.A53B.01A	IL1RAP::COL6A5	0.13	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.22.5491.01A	IL1RAP::TMEM207	3.0	tier1	In-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.39.5035.01A	IL1RAP::TP63	0.069	tier2	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.90.6837.01A	IL1RAP::TPRG1	0.93	tier3	5UTR-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.NC.A5HH.01A	IL27RA::RLN3	0.019	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.22.4601.01A	INADL::PRSS50	0.91	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.77.8153.01A	INCENP::CCS	0.016	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.56.6546.01A	INPP5E::SEC16A	0.025	tier3	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.NK.A7XE.01A	INTS5::C11orf48	0.34	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.43.5670.01A	IQCK::ABCC1	2.1	tier1	In-frame	A0 : B1	A0 : B1	validated
LUSC	TCGA.94.8491.01A	IRF2::MORN1	0.51	tier3	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.94.8490.01A	IRF6::SRGAP2	3.2	tier1	NA	A0 : B0	A0 : B0	NA
LUSC	TCGA.63.A5M9.01A	ITGA2::CEACAM21	1.6	tier2	CDS-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.39.5035.01A	ITGA5::GTSF1	0.89	tier4	Out-of-frame	A0 : B1	A0 : B0	NA
LUSC	TCGA.43.2578.01A	ITGAV::FARP2	1.0	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.60.2722.01A	ITGB4::OTOP2	0.13	tier1	5UTR-CDS	A0 : B0	A0 : B0	non-validated
LUSC	TCGA.85.A50M.01A	ITGB4::PTN	0.34	tier3	3UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.22.1005.01A	ITGB6::RBMS1	0.71	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.60.2706.01A	ITM2B::ESD	100.0	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.22.4593.01A	ITPK1::KIAA0284	0.23	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.85.8071.01A	ITPKA::RTF1	0.33	tier3	In-frame	A0 : B1	A0 : B0	NA
LUSC	TCGA.22.5477.01A	ITPR1::SUMF1	4.0	tier1	5UTR-CDS	A0 : B0	A0 : B0	non-validated
LUSC	TCGA.98.A53A.01A	JARID2::DTNBP1	0.39	tier4	Out-of-frame	A1 : B1	A0 : B0	NA
LUSC	TCGA.68.A59I.01A	JAZF1::SFRP4	0.094	tier1	NA	A0 : B0	A0 : B0	NA
LUSC	TCGA.85.8582.01A	JUP::EIF2AK2	100.0	tier3	NA	A0 : B0	A0 : B0	NA
LUSC	TCGA.85.8666.01A	KAT6A::AGPAT6	0.6	tier2	CDS-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.43.8115.01A	KAT6A::CSMD1	0.33	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.46.6025.01A	KCNAB2::POLB	0.016	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
LUSC	TCGA.60.2720.01A	KCNK5::KIF6	1.2	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.63.A5MB.01A	KCNQ3::LRRC6	1.1	tier3	Out-of-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.85.8354.01A	KCNQ5::AMPH	0.072	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.60.2722.01A	KCNQ5::DST	0.039	tier1	Out-of-frame	A1 : B0	A0 : B0	non-validated
LUSC	TCGA.43.2578.01A	KDM2A::C11orf80	0.54	tier1	In-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.33.6737.01A	KDM2A::RHOD	0.26	tier1	In-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.60.2715.01A	KDM3A::PUS10	1.4	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.98.8022.01A	KDM4A::PTCH2	2.4	tier1	Out-of-frame	A0 : B0	A0 : B0	validated
LUSC	TCGA.77.7141.01A	KIAA0020::CEP152	0.46	tier4	NA	A0 : B0	A0 : B0	NA
LUSC	TCGA.60.2722.01A	KIAA0100::ALKBH5	2.8	tier1	In-frame	A1 : B0	A0 : B0	non-validated
LUSC	TCGA.66.2758.01A	KIAA0100::SEZ6	1.1	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.22.5485.01A	KIAA0195::NUP85	0.037	tier4	In-frame	A0 : B1	A0 : B1	non-validated
LUSC	TCGA.85.8580.01A	KIAA0907::ARHGEF2	0.2	tier1	In-frame	A0 : B1	A0 : B0	NA
LUSC	TCGA.46.6025.01A	KIAA1033::PCDH9	0.37	tier4	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.94.8491.01A	KIAA1191::NOP16	0.13	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.NC.A5HP.01A	KIAA1217::LPP	0.12	tier1	NA	A0 : B0	A0 : B0	NA
LUSC	TCGA.77.A5GH.01A	KIAA1267::PARD3B	1.5	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.33.4532.01A	KIAA1267::UNC45B	1.1	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.85.8070.01A	KIAA1267::WHSC1L1	0.084	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.O2.A52N.01A	KIAA1310::BPIFB2	1.2	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.98.A539.01A	KIAA1429::FAM49B	0.51	tier2	CDS-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.96.7544.01A	KIAA1432::EPYC	1.3	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.96.7544.01A	KIAA1432::SLC1A1	3.1	tier2	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.33.4582.01A	KIAA1609::CYBA	1.5	tier4	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.63.A5MM.01A	KIAA1797::ELAVL2	0.83	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.66.2765.01A	KIAA1967::FGFR2	0.23	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.56.8082.01A	KIAA2026::PHF20	1.5	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.77.8138.01A	KIF13A::CCHCR1	0.73	tier1	In-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.37.A5EM.01A	KIF13A::F13A1	0.023	tier1	In-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.XC.AA0X.01A	KIF21A::MIPOL1	0.49	tier2	Out-of-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.LA.A7SW.01A	KIF26B::AKT3	0.11	tier2	Out-of-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.22.5479.01A	KIF26B::SMYD3	1.4	tier4	In-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.56.8083.01A	KIF26B::SMYD3	1.4	tier1	In-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.63.A5MB.01A	KIF26B::SMYD3	1.4	tier4	In-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.85.8481.01A	KIF26B::SMYD3	1.4	tier4	Out-of-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.96.8169.01A	KIT::DNAJB14	1.1	tier2	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.85.8287.01A	KIT::SLC4A4	0.12	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.22.1017.01A	KITLG::CCDC6	1.2	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.18.3414.01A	KITLG::TNNC1	0.52	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.MF.A522.01A	KLF5::PIBF1	0.11	tier3	NA	A0 : B0	A0 : B0	NA
LUSC	TCGA.NK.A5CX.01A	KLHL22::DENND5A	1.6	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.66.2793.01A	KLHL22::ZNF74	0.29	tier1	Out-of-frame	A0 : B0	A0 : B0	non-validated
LUSC	TCGA.21.1071.01A	KLHL24::CEP89	0.1	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.56.7223.01A	KLHL24::MCF2L2	0.016	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.34.5232.01A	KNTC1::MLXIP	5.0	tier1	Out-of-frame	A0 : B1	A0 : B0	NA
LUSC	TCGA.LA.A7SW.01A	KPNA6::ZCCHC17	1.6	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.85.A4QR.01A	KRT15::PTN	1.0	tier3	3UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.56.8082.01A	KRT19::CTNND1	1.1	tier4	3UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.56.8304.01A	KRT19::PFKP	0.47	tier4	3UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.94.A5I4.01A	KRT19::PLEKHA5	1.1	tier4	NA	A0 : B0	A0 : B0	NA
LUSC	TCGA.43.8115.01A	LAMA3::C18orf8	0.23	tier1	In-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.O2.A52N.01A	LAMA5::C20orf151	0.008	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.O2.A52N.01A	LANCL2::CHODL	0.11	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.22.1012.01A	LARP4B::C12orf69	5.1	tier3	CDS-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.66.2759.01A	LATS1::LACE1	0.37	tier1	5UTR-CDS	A0 : B0	A0 : B0	non-validated
LUSC	TCGA.92.8065.01A	LCN2::ZNFX1	0.083	tier4	3UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.85.A50M.01A	LDLRAD3::SNCB	0.65	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.85.A53L.01A	LETM2::ERCC2	0.87	tier2	In-frame	A0 : B0	A0 : B1	NA
LUSC	TCGA.68.8250.01A	LIFR::BCAS3	0.11	tier1	In-frame	A0 : B0	A0 : B0	non-validated
LUSC	TCGA.22.A5C4.01A	LIMCH1::OCIAD2	0.024	tier1	CDS-5UTR	A1 : B0	A0 : B0	NA
LUSC	TCGA.68.8251.01A	LIMD1::LARS2	0.045	tier2	Out-of-frame	A0 : B1	A0 : B0	NA
LUSC	TCGA.85.A50M.01A	LINGO2::TLN1	0.079	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.66.2787.01A	LMAN2L::FER1L5	0.55	tier3	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.33.AASB.01A	LMBRD1::COL9A1	0.37	tier3	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.63.A5MG.01A	LMTK2::IMMP2L	0.48	tier1	In-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.92.8063.01A	LMTK2::PCLO	0.53	tier1	Out-of-frame	A1 : B1	A0 : B0	NA
LUSC	TCGA.43.7657.01A	LNX1::IFT122	0.16	tier1	In-frame	A1 : B0	A0 : B1	NA
LUSC	TCGA.85.6175.01A	LOH12CR1::PTPRR	0.002	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.92.7341.01A	LPHN3::BBS9	0.28	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.22.5491.01A	LPP::GOLIM4	0.23	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.66.2756.01A	LPP::ST6GAL1	0.87	tier1	5UTR-CDS	A0 : B0	A0 : B0	non-validated
LUSC	TCGA.60.2719.01A	LRBA::SH3D19	1.9	tier1	In-frame	A1 : B0	A0 : B0	non-validated
LUSC	TCGA.22.5482.01A	LRP1B::HECW2	0.34	tier1	In-frame	A0 : B1	A0 : B0	NA
LUSC	TCGA.85.8584.01A	LRRC23::LPCAT3	0.037	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.NC.A5HL.01A	LRRC8D::TMEM9	3.3	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.90.6837.01A	LRSAM1::GARNL3	0.13	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.33.6738.01A	LSM1::WHSC1L1	0.063	tier1	Out-of-frame	A0 : B1	A0 : B0	NA
LUSC	TCGA.22.5491.01A	LTBP1::BIRC6	0.084	tier3	In-frame	A1 : B1	A0 : B1	NA
LUSC	TCGA.58.8390.01A	LTBP1::BIRC6	0.084	tier4	3UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.94.8491.01A	LTBP1::BIRC6	0.084	tier1	3UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.L3.A524.01A	LTBP1::BIRC6	0.084	tier4	In-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.L3.A524.01A	LTBP4::SUPT16H	0.86	tier3	NA	A0 : B0	A0 : B0	NA
LUSC	TCGA.85.8355.01A	LTF::ZNFX1	0.78	tier4	3UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.98.A53A.01A	LUC7L::AXIN1	0.95	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.92.8064.01A	LYPD6B::MBD5	0.14	tier2	5UTR-CDS	A0 : B0	A0 : B0	non-validated
LUSC	TCGA.63.A5MR.01A	LYSMD2::SCG3	0.21	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.90.A4EE.01A	LYZ::BIRC6	0.02	tier4	3UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.33.4587.01A	MACF1::INPP5B	1.1	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.33.4587.01A	MACF1::RHBDL2	0.51	tier1	NA	A0 : B0	A0 : B0	NA
LUSC	TCGA.22.A5C4.01A	MACROD2::UBOX5	0.068	tier2	CDS-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.22.A5C4.01A	MAGED1::CYP4F2	0.24	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.77.8131.01A	MALT1::NOL4	1.2	tier3	In-frame	A0 : B0	A1 : B0	NA
LUSC	TCGA.22.5481.01A	MANBA::LIMCH1	0.75	tier1	In-frame	A0 : B1	A0 : B0	NA
LUSC	TCGA.77.8009.01A	MAP1B::SUPT16H	0.047	tier3	3UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.85.A510.01A	MAP3K10::C19orf47	0.074	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.O2.A52S.01A	MAP3K3::FCHSD2	0.22	tier1	CDS-5UTR	A1 : B0	A0 : B0	NA
LUSC	TCGA.NK.A5CR.01A	MAP3K4::FRMD1	0.6	tier3	NA	A0 : B0	A0 : B0	NA
LUSC	TCGA.66.2759.01A	MAP3K5::NKAIN2	0.17	tier1	In-frame	A1 : B0	A0 : B0	non-validated
LUSC	TCGA.LA.A7SW.01A	MAP4K5::ATP5S	0.021	tier2	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.18.3421.01A	MAPK10::UGT8	0.049	tier2	5UTR-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.43.5668.01A	MARCH1::PTPN13	0.52	tier1	5UTR-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.77.6843.01A	MARCH8::MSMB	100.0	tier3	In-frame	A0 : B0	A0 : B0	non-validated
LUSC	TCGA.94.7557.01A	MARK2::BUB1B	2.2	tier1	In-frame	A1 : B1	A0 : B1	NA
LUSC	TCGA.85.A53L.01A	MARK3::EIF5	0.22	tier1	CDS-5UTR	A1 : B0	A0 : B0	NA
LUSC	TCGA.18.3411.01A	MARK3::ENTPD5	9.3	tier2	CDS-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.43.5668.01A	MARK3::FBLN5	0.09	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.60.2696.01A	MBNL1::DCUN1D1	0.52	tier1	In-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.77.A5GH.01A	MBNL2::GLI3	0.39	tier1	Out-of-frame	A0 : B1	A0 : B0	NA
LUSC	TCGA.46.3765.01A	MCCC1::ADAMTSL3	0.72	tier1	Out-of-frame	A1 : B1	A0 : B0	NA
LUSC	TCGA.56.7223.01A	MCCC1::FXR1	3.9	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.96.7545.01A	MCFD2::TTC7A	0.064	tier1	5UTR-CDS	A0 : B1	A0 : B0	validated
LUSC	TCGA.43.5668.01A	MDK::ERBB3	0.85	tier2	3UTR-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.NC.A5HE.01A	MDM2::NUP107	0.006	tier1	In-frame	A0 : B1	A0 : B0	NA
LUSC	TCGA.18.3419.01A	ME1::SNAP91	2.0	tier2	Out-of-frame	A0 : B0	A1 : B0	NA
LUSC	TCGA.43.A474.01A	MECOM::ARMC8	0.007	tier1	In-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.58.8393.01A	MED1::SLC39A11	0.047	tier2	CDS-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.63.A5M9.01A	MED12L::GOLIM4	1.7	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.66.2793.01A	MED15::PI4KA	0.81	tier1	NA	A0 : B0	A0 : B0	validated
LUSC	TCGA.60.2698.01A	MED20::TLL2	2.0	tier1	In-frame	A0 : B0	A0 : B0	non-validated
LUSC	TCGA.NC.A5HH.01A	MED23::RNF217	0.6	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.85.7843.01A	MED29::ADAM18	0.002	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.52.7809.01A	METAP1D::HAT1	0.2	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.43.2581.01A	METTL21B::RASSF3	1.2	tier2	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.NC.A5HL.01A	METTL4::STXBP5L	0.36	tier2	Out-of-frame	A0 : B1	A0 : B0	NA
LUSC	TCGA.58.8392.01A	MFSD2A::SLC5A9	0.88	tier2	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.85.8479.01A	MGA::SPTBN5	1.4	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.46.6026.01A	MGAT4C::PLD1	0.19	tier2	5UTR-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.77.8140.01A	MGRN1::C16orf96	0.23	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.66.2790.01A	MICALCL::HS2ST1	2.5	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.43.2581.01A	MIF4GD::SDK2	1.9	tier2	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.90.7769.01A	MINPP1::ASXL2	0.018	tier3	Out-of-frame	A0 : B1	A0 : B0	NA
LUSC	TCGA.98.A538.01A	MIRLET7BHG::FBLN1	0.48	tier4	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.22.A5C4.01A	MKKS::MMP24	1.5	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.60.2706.01A	MKL1::SLC25A17	1.3	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.77.7337.01A	MLL2::CUX2	0.11	tier3	Out-of-frame	A0 : B1	A0 : B0	NA
LUSC	TCGA.NC.A5HF.01A	MLL3::AGK	0.67	tier3	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.98.8023.01A	MLLT4::GMDS	0.14	tier3	In-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.LA.A7SW.01A	MNAT1::MUDENG	0.007	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.77.8131.01A	MNAT1::SPSB1	0.29	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.L3.A524.01A	MORC2::PATZ1	0.17	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.37.3792.01A	MORC3::FAM3B	0.17	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.58.8386.01A	MRC2::VMP1	0.46	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.58.A46K.01A	MREG::ARL4D	0.89	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.43.6771.01A	MRPL21::FAM168A	0.33	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.18.3414.01A	MRPL35::CTNNA2	0.58	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.37.4135.01A	MRPL48::GDPD5	0.023	tier1	Out-of-frame	A0 : B0	A0 : B0	validated
LUSC	TCGA.66.2754.01A	MRRF::KIAA0368	0.15	tier2	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.60.2695.01A	MSI2::AKAP1	0.3	tier1	CDS-5UTR	A0 : B0	A0 : B0	non-validated
LUSC	TCGA.66.2783.01A	MSI2::ICAM2	0.1	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.L3.A524.01A	MSI2::SYNPO2	0.046	tier1	In-frame	A0 : B1	A0 : B0	NA
LUSC	TCGA.60.2715.01A	MSL1::SHANK2	0.39	tier1	NA	A0 : B0	A0 : B0	NA
LUSC	TCGA.63.A5MT.01A	MSL2::OPRM1	0.41	tier1	Out-of-frame	A1 : B0	A1 : B0	NA
LUSC	TCGA.56.5898.01A	MSN::HTR3D	0.067	tier3	In-frame	A1 : B0	A1 : B0	NA
LUSC	TCGA.85.6175.01A	MSRB3::BCL2L14	0.092	tier2	NA	A0 : B0	A0 : B0	NA
LUSC	TCGA.34.5240.01A	MTA1::PACS2	0.19	tier2	Out-of-frame	A0 : B0	A0 : B0	validated
LUSC	TCGA.63.A5MM.01A	MTAP::EEF1A2	1.4	tier1	In-frame	A0 : B1	A1 : B1	NA
LUSC	TCGA.46.3765.01A	MTF2::CTNND2	0.81	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.66.2793.01A	MTMR12::C5orf42	7.3	tier2	In-frame	A0 : B1	A0 : B0	validated
LUSC	TCGA.43.5668.01A	MTMR3::RNF215	0.18	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.66.2753.01A	MTRR::NMD3	1.2	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.66.2758.01A	MTSS1L::VAC14	0.25	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.77.8153.01A	MXI1::ADD3	0.013	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.43.5670.01A	MXRA8::CDK11A	0.26	tier1	CDS-5UTR	A0 : B0	A0 : B0	non-validated
LUSC	TCGA.85.A4CN.01A	MYBBP1A::FGF11	1.5	tier3	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.56.7730.01A	MYNN::NLGN1	0.13	tier4	Out-of-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.94.8491.01A	MYO1C::SMG6	0.092	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.77.8140.01A	MYO5B::MBD1	1.1	tier2	Out-of-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.85.A513.01A	MYSM1::DAB1	0.45	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.77.8140.01A	MYT1::TCEA2	1.2	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
LUSC	TCGA.22.5479.01A	MZF1::CCDC105	0.63	tier4	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.94.A4VJ.01A	N4BP1::DDX19B	0.24	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.33.4538.01A	NAALADL2::ABCC5	1.0	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.56.7730.01A	NAALADL2::MCCC1	0.14	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.70.6722.01A	NAALADL2::NCKAP5	1.3	tier1	In-frame	A0 : B1	A0 : B0	NA
LUSC	TCGA.56.1622.01A	NAALADL2::SMC5	0.086	tier3	Out-of-frame	A1 : B0	A0 : B0	non-validated
LUSC	TCGA.NC.A5HE.01A	NAB1::GULP1	0.33	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.18.4086.01A	NADSYN1::C11orf34	0.53	tier4	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.98.A53A.01A	NAPG::FAM38B	0.03	tier1	In-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.85.6561.01A	NBAS::DDX1	0.06	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.68.7755.01A	NBEAL1::MLLT3	0.76	tier1	In-frame	A0 : B0	A0 : B0	non-validated
LUSC	TCGA.66.2754.01A	NCALD::NSMCE2	0.56	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.22.A5C4.01A	NCAM2::APOL2	0.78	tier2	CDS-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.43.6647.01A	NCAPG2::IQCJ-SCHIP1	0.14	tier1	In-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.90.7767.01A	NCAPH::KCNIP3	0.31	tier1	In-frame	A1 : B0	A0 : B0	non-validated
LUSC	TCGA.56.7580.01A	NCEH1::FNDC3B	0.38	tier1	Out-of-frame	A1 : B1	A0 : B0	NA
LUSC	TCGA.58.8391.01A	NCKAP5::ERBB4	0.94	tier2	Out-of-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.85.A50M.01A	NCL::RBM25	0.18	tier3	3UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.85.A4JB.01A	NCOA1::UBXN2A	0.13	tier3	5UTR-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.37.4133.01A	NCOA3::EYA2	0.77	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.6A.AB49.01A	NCOA3::GGT7	2.6	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.33.AASL.01A	NCOA4::MSMB	0.87	tier4	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.33.4566.01A	NDST1::TCOF1	0.12	tier2	In-frame	A1 : B1	A0 : B0	NA
LUSC	TCGA.39.5035.01A	NDUFA10::SGPP2	0.014	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.43.5668.01A	NDUFS4::EXTL3	1.9	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.56.8622.01A	NEK11::FAM150A	1.5	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.39.5034.01A	NEK7::ATP2B4	0.38	tier1	5UTR-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.94.8491.01A	NEK7::RAB3GAP2	0.088	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.37.3783.01A	NEMF::C14orf182	0.48	tier1	In-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.22.1012.01A	NEURL::PDCD11	0.28	tier1	Out-of-frame	A0 : B1	A0 : B0	NA
LUSC	TCGA.92.8063.01A	NF1::AGTR1	0.088	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.77.7142.01A	NF1::RNF135	0.93	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.94.7557.01A	NFAT5::CDH3	1.9	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.43.A56V.01A	NFAT5::NOB1	0.25	tier4	5UTR-CDS	A0 : B1	A0 : B0	NA
LUSC	TCGA.18.4721.01A	NFE2L2::PDE11A	0.45	tier1	In-frame	A0 : B0	A0 : B0	non-validated
LUSC	TCGA.18.3415.01A	NFE2L2::ZC3H13	0.019	tier1	Out-of-frame	A1 : B0	A0 : B0	validated
LUSC	TCGA.43.6143.01A	NFIB::FREM1	3.0	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.34.8456.01A	NFIX::DNM2	0.027	tier1	In-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.94.8491.01A	NFIX::GCDH	0.031	tier3	CDS-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.56.8628.01A	NFIX::WDR26	0.4	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.77.7140.01A	NFKBIZ::ZBED2	0.092	tier2	5UTR-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.18.4721.01A	NFX1::ACO1	2.1	tier2	In-frame	A0 : B0	A0 : B0	validated
LUSC	TCGA.77.A5GA.01A	NFX1::NOL6	0.78	tier3	Out-of-frame	A0 : B1	A0 : B1	NA
LUSC	TCGA.22.4604.01A	NFX1::TMEM8B	0.17	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.85.8355.01A	NIN::STXBP6	0.003	tier3	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.77.7465.01A	NINL::GINS1	0.16	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.22.4595.01A	NIPBL::FGF10	0.23	tier4	In-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.77.8153.01A	NIPBL::MAPRE1	0.98	tier1	5UTR-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.63.A5MW.01A	NIPBL::STK24	1.6	tier2	5UTR-CDS	A0 : B1	A0 : B0	NA
LUSC	TCGA.33.6737.01A	NKAIN2::MS4A12	1.6	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.39.5034.01A	NKX2-1::SLC25A21	0.89	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.43.2581.01A	NMT1::NME1-NME2	0.21	tier1	CDS-5UTR	A1 : B0	A0 : B0	NA
LUSC	TCGA.34.5232.01A	NOC4L::STAB2	0.48	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.77.A5GH.01A	NOL9::DNAJC11	0.78	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.77.A5GH.01A	NOP58::AC079354.1	0.064	tier3	NA	A0 : B0	A0 : B0	NA
LUSC	TCGA.33.A4WN.01A	NOTCH2::CWH43	0.082	tier1	In-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.98.A53I.01A	NOTCH3::UBTF	1.4	tier3	3UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.66.2782.01A	NPEPL1::DSN1	0.21	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.21.1076.01A	NPLOC4::P4HB	1.7	tier4	In-frame	A1 : B0	A1 : B0	non-validated
LUSC	TCGA.85.A4CN.01A	NPLOC4::PDE6G	0.68	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.NC.A5HD.01A	NPLOC4::PDE6G	0.68	tier3	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.33.4547.01A	NRF1::MTMR1	0.57	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.85.A50M.01A	NSD1::C11orf58	0.27	tier1	In-frame	A0 : B1	A0 : B0	NA
LUSC	TCGA.NC.A5HL.01A	NSD1::ZNF346	0.1	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.90.7964.01A	NSMCE1::PEX11G	0.039	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.21.5784.01A	NTN1::STX8	0.2	tier4	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.66.2800.01A	NUB1::ABCB8	1.9	tier1	In-frame	A1 : B0	A1 : B0	NA
LUSC	TCGA.77.7142.01A	NUDT3::DNAH8	2.4	tier1	In-frame	A0 : B1	A0 : B0	NA
LUSC	TCGA.85.A4JC.01A	NUFIP1::FAAH	0.26	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.18.3410.01A	NUMA1::ABHD12	0.16	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.39.5031.01A	NUMB::GPR68	0.53	tier3	CDS-5UTR	A1 : B0	A0 : B0	NA
LUSC	TCGA.43.8115.01A	NUP35::NCKAP1	1.0	tier2	In-frame	A1 : B1	A0 : B1	NA
LUSC	TCGA.NK.A5D1.01A	NUP85::NR5A2	5.1	tier3	In-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.18.3421.01A	NXF1::WDR74	0.014	tier2	NA	A0 : B0	A0 : B0	NA
LUSC	TCGA.18.4083.01A	OAS2::C12orf51	2.6	tier2	CDS-5UTR	A0 : B0	A1 : B0	NA
LUSC	TCGA.NC.A5HO.01A	OPA1::EHHADH	3.1	tier3	In-frame	A0 : B1	A0 : B0	NA
LUSC	TCGA.94.7943.01A	OPA1::PPP2R3A	1.6	tier1	Out-of-frame	A0 : B0	A0 : B0	validated
LUSC	TCGA.33.4587.01A	OSBPL8::ACSS3	0.36	tier2	Out-of-frame	A1 : B1	A0 : B0	NA
LUSC	TCGA.68.7755.01A	OTUD7B::CTSS	3.2	tier1	Out-of-frame	A1 : B0	A0 : B0	validated
LUSC	TCGA.68.7755.01A	OTUD7B::HORMAD1	1.5	tier1	CDS-5UTR	A1 : B0	A0 : B0	non-validated
LUSC	TCGA.63.5131.01A	OXCT1::TMEM17	0.75	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.52.7809.01A	OXSR1::MYD88	1.6	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.NC.A5HF.01A	P4HB::L3MBTL4	0.42	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.85.8276.01A	PACS1::CHKA	0.4	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.51.6867.01A	PAG1::GAD2	0.022	tier3	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.56.A4BX.01A	PAK1::LNP1	0.29	tier1	5UTR-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.66.2756.01A	PAK2::ECE2	2.6	tier1	5UTR-CDS	A0 : B0	A0 : B0	non-validated
LUSC	TCGA.94.8491.01A	PANK4::RGS6	0.29	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.34.5236.01A	PANX1::CCDC67	0.27	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.77.A5GH.01A	PAPSS2::BID	0.008	tier1	In-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.77.7140.01A	PARD3::NSUN6	0.039	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.70.6722.01A	PARD3B::VWC2L	0.032	tier1	In-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.56.7823.01B	PARP8::CRYL1	0.12	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.56.8629.01A	PARVB::ATP6V1D	0.11	tier1	Out-of-frame	A0 : B1	A0 : B0	NA
LUSC	TCGA.94.8491.01A	PAXIP1::NCAPG2	0.72	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.85.8584.01A	PC::KDM2A	0.28	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.43.6770.01A	PCGF3::FANCI	0.96	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.56.A4ZK.01A	PCID2::ATP4B	0.42	tier1	Out-of-frame	A1 : B0	A1 : B0	NA
LUSC	TCGA.63.A5MH.01A	PDCD2L::KIAA0355	0.95	tier3	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.77.A5GH.01A	PDCD6::SDHA	0.34	tier3	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.22.4613.01A	PDE4A::S1PR5	0.42	tier2	CDS-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.39.5029.01A	PDE4D::DEPDC1B	0.06	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
LUSC	TCGA.77.8143.01A	PDE4D::DEPDC1B	0.06	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
LUSC	TCGA.63.A5MY.01A	PDE4D::KHDRBS3	2.0	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.22.0940.01A	PDE4D::MCTP1	0.13	tier1	Out-of-frame	A1 : B1	A0 : B0	NA
LUSC	TCGA.77.7142.01A	PDE4D::RAB3C	0.005	tier1	In-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.66.2778.01A	PDE4D::RGS7BP	0.35	tier3	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.77.7142.01A	PDIA5::DIRC2	0.23	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.85.8582.01A	PDXDC1::NAV2	0.44	tier1	In-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.43.8115.01A	PELI2::FBXO33	0.81	tier3	In-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.43.7658.01A	PEX1::AKAP9	0.046	tier2	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.60.2715.01A	PEX13::VPS24	0.2	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.63.A5MH.01A	PEX14::PRG4	0.029	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.56.A4BX.01A	PGAP3::GRB7	0.21	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.58.A46K.01A	PGD::NTSR1	0.024	tier1	In-frame	A1 : B0	A1 : B0	NA
LUSC	TCGA.56.1622.01A	PHC3::FNDC3B	0.033	tier1	In-frame	A1 : B0	A0 : B0	non-validated
LUSC	TCGA.94.7943.01A	PHC3::SLC7A14	0.26	tier1	In-frame	A1 : B0	A0 : B0	non-validated
LUSC	TCGA.NC.A5HJ.01A	PHF11::SETDB2	0.32	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.L3.A524.01A	PHF21A::AMBRA1	0.11	tier3	NA	A0 : B0	A0 : B0	NA
LUSC	TCGA.LA.A7SW.01A	PHF21A::CKAP5	0.004	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.51.6867.01A	PHLDB2::CD96	0.27	tier1	In-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.66.2742.01A	PHLDB2::RIMS2	0.5	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.21.1083.01A	PHLPP1::WDR12	6.3	tier2	Out-of-frame	A0 : B0	A0 : B0	non-validated
LUSC	TCGA.85.8580.01A	PHRF1::PTDSS2	0.039	tier1	In-frame	A1 : B1	A1 : B0	NA
LUSC	TCGA.63.A5MI.01A	PHTF2::RSBN1L	2.0	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.77.6842.01A	PI4KA::PRODH	2.5	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.21.1081.01A	PI4KA::RREB1	0.17	tier1	Out-of-frame	A0 : B1	A0 : B0	NA
LUSC	TCGA.21.1082.01A	PIBF1::C11orf65	0.49	tier4	Out-of-frame	A0 : B0	A0 : B0	validated
LUSC	TCGA.85.8582.01A	PIGK::TGFBR3	0.025	tier3	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.56.8201.01A	PIGU::ACSS2	0.051	tier1	In-frame	A0 : B1	A0 : B0	NA
LUSC	TCGA.37.4135.01A	PIK3C3::TRPC6	0.45	tier1	Out-of-frame	A0 : B0	A0 : B0	non-validated
LUSC	TCGA.66.2756.01A	PIK3CB::BFSP2	0.9	tier1	In-frame	A0 : B0	A0 : B0	non-validated
LUSC	TCGA.77.A5GH.01A	PIK3R1::RP11-404L6.2	0.009	tier4	CDS-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.22.5474.01A	PIKFYVE::ZNF124	0.73	tier2	Out-of-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.68.A59I.01A	PINX1::XKR6	100.0	tier2	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.66.2754.01A	PIP5K1A::SLC20A2	1.7	tier2	CDS-5UTR	A1 : B0	A0 : B0	NA
LUSC	TCGA.39.5024.01A	PIP5K1A::TNFAIP8L2	0.55	tier4	CDS-5UTR	A1 : B0	A0 : B0	NA
LUSC	TCGA.56.8082.01A	PISD::PRR14L	0.29	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.43.8116.01A	PITPNA::PRPF8	3.3	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.L3.A524.01A	PITPNB::C22orf25	0.24	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.98.8021.01A	PITPNM2::KCTD3	0.93	tier3	Out-of-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.56.6545.01A	PJA2::GPR98	0.97	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.33.4586.01A	PKM2::TNNT1	0.028	tier4	NA	A0 : B0	A0 : B0	non-validated
LUSC	TCGA.56.7582.01A	PKP1::CLCN3	1.3	tier4	NA	A0 : B0	A0 : B0	non-validated
LUSC	TCGA.22.A5C4.01A	PLCB1::MCM8	0.97	tier1	In-frame	A0 : B1	A0 : B0	NA
LUSC	TCGA.22.A5C4.01A	PLCB1::RBL1	0.12	tier1	In-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.63.A5MP.01A	PLD1::FNDC3B	1.7	tier3	5UTR-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.33.AASJ.01A	PLEKHA1::BTBD16	3.0	tier1	In-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.18.3416.01A	PLS1::TFDP2	1.3	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.L3.A524.01A	PLXNC1::CRADD	0.37	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.LA.A7SW.01A	POLA2::CAPN1	0.034	tier1	In-frame	A0 : B0	A1 : B0	NA
LUSC	TCGA.77.8133.01A	POLR1A::REEP1	0.075	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.63.A5MI.01A	POLR3K::C19orf63	1.2	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.77.A5GH.01A	POU2AF1::BTG4	100.0	tier1	CDS-5UTR	A1 : B0	A0 : B0	NA
LUSC	TCGA.63.A5M9.01A	PPFIA1::MTL5	2.3	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.33.6738.01A	PPFIA1::OAF	0.46	tier3	In-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.85.A4QQ.01A	PPFIA1::RBFOX2	0.11	tier1	In-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.85.A4QQ.01A	PPFIA1::SHANK2	0.48	tier1	In-frame	A0 : B1	A0 : B0	NA
LUSC	TCGA.66.2759.01A	PPFIA3::ANK1	0.033	tier2	5UTR-CDS	A0 : B1	A0 : B0	validated
LUSC	TCGA.85.A4JB.01A	PPIG::FAM117B	0.38	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.52.7809.01A	PPM1B::SRBD1	1.8	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.94.8491.01A	PPM1G::IFT172	0.13	tier1	Out-of-frame	A1 : B0	A1 : B0	NA
LUSC	TCGA.56.8625.01A	PPM1H::C12orf66	0.16	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.98.A53A.01A	PPP1CA::PPP2R3C	100.0	tier3	3UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.51.6867.01A	PPP1CB::DRAM1	0.05	tier1	NA	A0 : B0	A0 : B0	NA
LUSC	TCGA.85.8276.01A	PPP1R12A::TBC1D30	0.036	tier2	Out-of-frame	A1 : B1	A0 : B0	NA
LUSC	TCGA.43.8115.01A	PPP1R12A::XRCC6BP1	0.88	tier1	In-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.37.4130.01A	PPP1R12B::LGR6	0.12	tier3	In-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.39.5040.01A	PPP1R12B::SUSD4	0.4	tier4	Out-of-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.52.7810.01A	PPP2R3A::SPSB4	0.7	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.96.7544.01A	PPP2R5D::KIAA0240	0.71	tier2	In-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.22.4593.01A	PPP2R5E::PLEKHH1	0.036	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.43.6771.01A	PPP6R3::ARHGAP1	0.18	tier1	5UTR-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.18.4083.01A	PPP6R3::LRP5	3.3	tier4	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.NC.A5HQ.01A	PPP6R3::LRP5	3.3	tier3	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.O2.A5IB.01A	PPP6R3::MGAM	1.7	tier1	CDS-5UTR	A1 : B0	A0 : B0	NA
LUSC	TCGA.94.7557.01A	PRDX1::DDX27	0.4	tier4	NA	A0 : B0	A0 : B0	NA
LUSC	TCGA.77.A5GA.01A	PRELID2::MEGF10	0.17	tier2	3UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.22.4593.01A	PRKAR2B::HMCN1	0.7	tier2	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.33.4587.01A	PRKCA::IGF2BP3	3.0	tier1	In-frame	A1 : B0	A1 : B0	NA
LUSC	TCGA.66.2793.01A	PRKCA::SDK1	0.6	tier2	In-frame	A0 : B1	A0 : B0	validated
LUSC	TCGA.56.8304.01A	PRR12::FLT3LG	0.25	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.96.8169.01A	PRRC2C::FMO1	2.8	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.56.8629.01A	PRTG::ATPBD4	0.29	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.NC.A5HK.01A	PSD3::INTS10	0.096	tier2	Out-of-frame	A1 : B1	A0 : B0	NA
LUSC	TCGA.37.A5EL.01A	PSMC6::GPR137C	0.3	tier1	NA	A0 : B0	A0 : B0	NA
LUSC	TCGA.34.A5IX.01A	PTEN::KIF20B	0.004	tier2	Out-of-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.37.A5EN.01A	PTGFRN::CD2	0.1	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.46.3767.01A	PTK2::UBE2H	3.2	tier4	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.NC.A5HM.01A	PTPN4::GRID1	0.18	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.70.6722.01A	PTPRG::MCM3AP	0.048	tier1	In-frame	A1 : B1	A0 : B0	NA
LUSC	TCGA.34.5239.01A	PUM1::EIF4G3	0.098	tier3	CDS-5UTR	A1 : B0	A1 : B0	NA
LUSC	TCGA.77.A5GH.01A	PUM2::C2orf43	2.2	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.56.8625.01A	PUS1::CTNNBIP1	2.8	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.66.2756.01A	PUSL1::AGRN	0.027	tier1	Out-of-frame	A0 : B1	A0 : B0	validated
LUSC	TCGA.37.4130.01A	PYGL::TRIM9	0.16	tier3	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.33.6738.01A	QKI::PACRG	1.9	tier3	Out-of-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.58.8386.01A	RAB11FIP3::RGS11	0.12	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.63.A5MW.01A	RAB30::CCDC90B	0.12	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.18.3419.01A	RAB3GAP1::CCNT2	0.3	tier1	In-frame	A1 : B0	A1 : B0	NA
LUSC	TCGA.94.8491.01A	RAB3GAP2::NEK7	0.088	tier3	CDS-5UTR	A1 : B0	A0 : B0	NA
LUSC	TCGA.77.8009.01A	RAB40C::MYH11	0.19	tier1	In-frame	A0 : B1	A0 : B0	NA
LUSC	TCGA.43.7657.01A	RAB4B::ADCK4	0.028	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.33.6738.01A	RAB9A::EGFL6	0.17	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.63.A5MY.01A	RAB9A::TRAPPC2	0.21	tier1	5UTR-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.60.2724.01A	RABEP1::PIGL	0.76	tier1	Out-of-frame	A0 : B0	A0 : B0	non-validated
LUSC	TCGA.90.A59Q.01A	RABGAP1::TTLL11	2.0	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.22.4601.01A	RABGGTB::FOXJ3	0.99	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.85.8584.01A	RAD51AP1::ATN1	1.2	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.37.3792.01A	RAD51AP1::SLCO1C1	0.022	tier1	In-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.43.A474.01A	RAD51B::GPHN	0.11	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.77.A5G6.01A	RAD51B::MARK3	0.34	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.66.2754.01A	RAD51D::SLCO6A1	0.82	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.33.4533.01A	RAI1::IFT20	0.92	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.85.8354.01A	RALA::C7orf10	2.1	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.85.8664.01A	RALGAPB::CTCFL	1.2	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.L3.A524.01A	RALGPS1::LMX1B	0.11	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.58.8386.01A	RAPGEF1::MCU	0.22	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.66.2758.01A	RASA2::ACPL2	0.24	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.77.7142.01A	RASA2::ACPL2	0.24	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.85.8277.01A	RASA2::KALRN	0.051	tier1	Out-of-frame	A0 : B1	A0 : B0	non-validated
LUSC	TCGA.NC.A5HL.01A	RASA2::SPSB4	0.17	tier3	Out-of-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.77.8139.01A	RASAL2::SOAT1	0.018	tier3	In-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.85.7843.01A	RASSF7::DEAF1	0.17	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.60.2695.01A	RB1::CNIH3	0.44	tier1	In-frame	A1 : B0	A1 : B0	non-validated
LUSC	TCGA.52.7809.01A	RB1::GADD45GIP1	1.5	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.60.2715.01A	RBBP8::ANXA4	0.072	tier1	CDS-5UTR	A1 : B0	A0 : B0	NA
LUSC	TCGA.77.8136.01A	RBM10::AL359075.1	0.016	tier1	CDS-5UTR	A1 : B0	A0 : B0	NA
LUSC	TCGA.60.2706.01A	RBM12B::RSPO2	0.019	tier1	NA	A0 : B0	A0 : B0	NA
LUSC	TCGA.22.4593.01A	RBM25::VRTN	6.7	tier3	NA	A0 : B0	A0 : B0	NA
LUSC	TCGA.L3.A524.01A	RBM38::FRMD4B	0.01	tier1	In-frame	A0 : B1	A0 : B0	NA
LUSC	TCGA.L3.A524.01A	RBM6::C3orf54	0.042	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.85.A53L.01A	RBM6::IDH2	0.38	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
LUSC	TCGA.77.7142.01A	RCOR1::LSAMP	4.3	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.60.2726.01A	REL::MAN1A2	0.96	tier1	In-frame	A0 : B0	A0 : B0	non-validated
LUSC	TCGA.68.8250.01A	RELN::CHRM2	0.7	tier1	CDS-5UTR	A0 : B0	A0 : B0	non-validated
LUSC	TCGA.98.8023.01A	RGS10::TIAL1	0.84	tier1	Out-of-frame	A0 : B1	A0 : B0	NA
LUSC	TCGA.18.3419.01A	RICTOR::FYB	0.038	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.77.A5G6.01A	RIN3::CCDC88C	0.31	tier2	Out-of-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.56.5898.01A	RNASE10::CD38	0.95	tier3	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.63.5128.01A	RNASEH2A::BEST2	0.31	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.77.7140.01A	RNF115::PIAS3	0.37	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.70.6723.01A	RNF121::PCDH9	7.1	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.85.A511.01A	RNF121::PPP6R3	0.48	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.18.3415.01A	RNF167::PLD2	0.006	tier2	Out-of-frame	A0 : B0	A0 : B0	non-validated
LUSC	TCGA.63.A5MY.01A	RNF180::GPX8	0.16	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.66.2771.01A	RNF19A::ANKRD46	1.8	tier1	5UTR-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.60.2706.01A	RNF19A::C8orf83	2.0	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.21.1080.01A	RNF19A::PRSS3	0.51	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.77.8136.01A	RNF24::RP11-352D3.2	0.28	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.56.8629.01A	RNF40::IL21R	0.25	tier1	CDS-5UTR	A1 : B0	A0 : B0	NA
LUSC	TCGA.66.2781.01A	ROBO1::MED12L	0.068	tier2	Out-of-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.56.6546.01A	ROBO2::ERLIN2	0.56	tier1	In-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.85.8048.01A	ROCK1::ABHD3	0.49	tier4	In-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.LA.A7SW.01A	ROCK1::CDH2	1.0	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.56.A49D.01A	ROCK1::RNF38	0.1	tier1	In-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.22.4604.01A	RP11-159G9.5::RALBP1	0.74	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.22.5481.01A	RP11-546D6.2::CDC6	0.41	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.NC.A5HQ.01A	RP11-762I7.5::VAMP8	0.015	tier4	NA	A0 : B0	A0 : B0	NA
LUSC	TCGA.70.6723.01A	RP11-849H4.2::RNF121	100.0	tier1	NA	A0 : B0	A0 : B0	NA
LUSC	TCGA.43.6770.01A	RPAP3::ADAM32	0.75	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.90.A4ED.01A	RPL18::RABEP1	0.74	tier4	NA	A0 : B0	A0 : B0	NA
LUSC	TCGA.63.6202.01A	RPRD2::BOLA1	1.1	tier1	CDS-5UTR	A1 : B0	A0 : B0	NA
LUSC	TCGA.58.8387.01A	RPS19::CEACAM5	100.0	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.77.A5G6.01A	RPS6KA5::ITPK1	0.5	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.85.8580.01A	RPS6KB1::FKBP10	1.8	tier4	Out-of-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.77.8153.01A	RPS6KB1::VMP1	1.4	tier3	In-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.94.8035.01A	RPS6KB1::VMP1	1.4	tier1	In-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.66.2788.01A	RPTOR::STXBP4	0.44	tier3	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.77.8009.01A	RRM2B::ZNF704	0.21	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.66.2766.01A	RRP12::EXOSC1	1.7	tier1	In-frame	A1 : B0	A1 : B0	non-validated
LUSC	TCGA.60.2726.01A	RSF1::INTS4	0.37	tier2	In-frame	A1 : B0	A1 : B0	non-validated
LUSC	TCGA.NC.A5HN.01A	RTKN::CTF1	0.16	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.66.2756.01A	RTN4::MITD1	2.0	tier1	In-frame	A1 : B0	A1 : B0	non-validated
LUSC	TCGA.96.A4JK.01A	RTN4R::DNAH2	0.024	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.43.6770.01A	RTN4R::TMEM22	0.013	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.77.A5GH.01A	RWDD1::FAM26D	0.022	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.43.8116.01A	RYR3::AVEN	0.073	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.85.A50M.01A	S100A6::PLEKHB2	1.3	tier3	3UTR-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.77.7337.01A	S100A8::FADS2	0.23	tier4	3UTR-CDS	A0 : B0	A0 : B1	NA
LUSC	TCGA.46.3767.01A	SACS::MIPEP	0.031	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.22.4594.01A	SAMD12::RTN1	1.1	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.21.5783.01A	SAMD12::TG	0.063	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.66.2744.01A	SBF2::MRVI1	0.14	tier2	In-frame	A0 : B1	A0 : B0	non-validated
LUSC	TCGA.37.4132.01A	SBF2::PRMT3	0.058	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.56.6545.01A	SCAF11::ADCY8	3.9	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.66.2769.01A	SCRN1::WDR53	1.1	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.22.A5C4.01A	SCRN1::WIPF3	0.062	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.85.7710.01A	SCYL2::DEPDC4	0.15	tier2	Out-of-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.77.A5GH.01A	SCYL3::KIFAP3	1.8	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.66.2783.01A	SEC14L1::SPOP	7.4	tier2	5UTR-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.NC.A5HK.01A	SEC16A::NOTCH1	0.069	tier2	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.56.A4ZK.01A	SEC22A::TXNRD3	0.13	tier1	NA	A0 : B0	A0 : B0	NA
LUSC	TCGA.37.A5EL.01A	SEC23B::CNGB3	0.53	tier4	In-frame	A0 : B1	A0 : B0	NA
LUSC	TCGA.46.6025.01A	SEC23B::PLEKHM3	0.13	tier4	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.77.8131.01A	SEC31A::AGMO	1.3	tier3	In-frame	A1 : B0	A1 : B0	NA
LUSC	TCGA.22.5492.01A	SEMA3C::CD36	0.44	tier1	CDS-5UTR	A1 : B0	A0 : B0	non-validated
LUSC	TCGA.77.A5G7.01B	SEMA3D::KCNU1	0.24	tier2	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.37.4135.01A	SEMA3F::RBM6	0.16	tier1	Out-of-frame	A0 : B0	A0 : B0	non-validated
LUSC	TCGA.66.2793.01A	SEMA4C::FAM178B	0.36	tier1	Out-of-frame	A0 : B0	A0 : B0	non-validated
LUSC	TCGA.21.1071.01A	SENP2::ANKRD27	0.26	tier1	In-frame	A1 : B1	A0 : B0	NA
LUSC	TCGA.56.8628.01A	SENP2::VPS8	1.0	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.52.7810.01A	SENP6::PPIL6	0.27	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.LA.A7SW.01A	SEPT10::SH3RF3	1.2	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.33.4566.01A	SERINC2::ZCCHC17	0.038	tier2	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.66.2758.01A	SERINC2::ZCCHC17	0.038	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.77.7142.01A	SERINC5::THBS4	0.77	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.66.2759.01A	SESN1::EYS	0.38	tier1	In-frame	A1 : B0	A0 : B0	non-validated
LUSC	TCGA.46.6025.01A	SETD4::B4GALT6	2.6	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.98.A53I.01A	SETMAR::EYS	0.076	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.43.A56U.01A	SF1::EHD1	0.56	tier4	In-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.43.2576.01A	SFT2D2::C1orf9	0.84	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.66.2787.01A	SGCB::SPATA18	0.057	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.58.8386.01A	SH3D21::THRAP3	1.4	tier1	CDS-5UTR	A1 : B0	A0 : B0	NA
LUSC	TCGA.18.3415.01A	SH3PXD2A::OBFC1	0.047	tier1	Out-of-frame	A0 : B0	A0 : B1	non-validated
LUSC	TCGA.96.A4JK.01A	SH3PXD2A::PDLIM1	2.1	tier1	In-frame	A1 : B1	A0 : B0	NA
LUSC	TCGA.85.A4QQ.01A	SH3RF2::SLC23A1	1.6	tier3	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.43.6771.01A	SHANK2::C11orf49	2.1	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.22.4609.01A	SHB::PAX5	0.069	tier1	In-frame	A0 : B1	A0 : B0	NA
LUSC	TCGA.77.A5G3.01A	SHH::PLCB1	0.095	tier2	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.94.7557.01A	SIK2::CARD17	0.013	tier1	In-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.NC.A5HL.01A	SIL1::SMC1B	0.29	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.85.A50M.01A	SIRT1::DNAJC12	0.6	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.85.8277.01A	SIRT6::CREB3L3	0.15	tier1	Out-of-frame	A1 : B0	A0 : B0	validated
LUSC	TCGA.56.7580.01A	SKIL::FNDC3B	0.097	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.LA.A7SW.01A	SLBP::LETM1	0.38	tier1	In-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.22.1016.01A	SLC12A8::BCAS1	0.22	tier1	Out-of-frame	A0 : B0	A0 : B0	validated
LUSC	TCGA.NC.A5HJ.01A	SLC1A1::SMARCA2	0.005	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.21.A5DI.01A	SLC1A3::CDH12	2.2	tier3	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.92.8065.01A	SLC1A3::MAPKAP1	0.15	tier1	In-frame	A0 : B1	A0 : B0	NA
LUSC	TCGA.60.2714.01A	SLC20A2::FBXW7	0.51	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.60.2708.01A	SLC20A2::ZMAT4	0.32	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.21.1081.01A	SLC22A23::TRAF3	0.61	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.98.8021.01A	SLC24A3::MACROD2	0.69	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.77.8144.01A	SLC25A13::MAGI2	0.018	tier1	In-frame	A0 : B1	A0 : B0	NA
LUSC	TCGA.94.A4VJ.01A	SLC25A16::NDUFA9	0.06	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.85.6175.01A	SLC25A36::PEX5L	1.5	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.O2.A52Q.01A	SLC25A44::SEMA4A	0.01	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.85.8664.01A	SLC2A10::ACSS2	0.48	tier1	Out-of-frame	A0 : B1	A0 : B0	NA
LUSC	TCGA.NC.A5HR.01A	SLC35A3::C1orf194	0.49	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.NC.A5HL.01A	SLC39A14::PIWIL2	0.24	tier3	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.37.A5EN.01A	SLC44A3::ABCD3	0.3	tier2	In-frame	A0 : B1	A0 : B1	NA
LUSC	TCGA.21.1071.01A	SLC47A2::FADS2	0.29	tier4	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.22.4604.01A	SLC9A9::KCNAB1	0.043	tier1	In-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.77.A5GH.01A	SLCO2A1::RYK	0.43	tier4	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.22.5485.01A	SLCO3A1::BMPR2	0.17	tier4	Out-of-frame	A1 : B0	A0 : B0	validated
LUSC	TCGA.21.1083.01A	SMAD2::CD226	0.047	tier1	5UTR-CDS	A0 : B0	A0 : B0	non-validated
LUSC	TCGA.63.A5MP.01A	SMAD4::NRG1	0.98	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.NC.A5HL.01A	SMAGP::NELL2	0.14	tier3	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.66.2771.01A	SMARCA4::C19orf38	0.064	tier1	In-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.NC.A5HM.01A	SMARCA4::KDM4B	1.2	tier2	Out-of-frame	A1 : B1	A0 : B0	NA
LUSC	TCGA.NC.A5HT.01A	SMO::TSPAN33	0.25	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.63.A5MV.01A	SMU1::AFAP1	0.57	tier4	CDS-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.56.A4ZK.01A	SMYD2::PGBD2	100.0	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.37.A5EL.01A	SNTB2::CIRH1A	0.23	tier1	NA	A0 : B0	A0 : B0	NA
LUSC	TCGA.56.8625.01A	SNTB2::TMCO7	1.7	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.18.3414.01A	SNUPN::ZNF233	0.66	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.22.5473.01A	SNX15::NAALADL1	0.19	tier4	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.56.7822.01A	SNX30::KIAA1958	3.2	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.39.5035.01A	SNX8::KDELR2	0.044	tier1	In-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.21.1081.01A	SOLH::WHSC1L1	0.26	tier1	5UTR-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.94.8491.01A	SOS1::CDKL4	0.47	tier3	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.34.5236.01A	SP3::STK39	0.25	tier1	In-frame	A0 : B1	A0 : B0	NA
LUSC	TCGA.68.8250.01A	SPAG1::STK3	0.43	tier2	In-frame	A0 : B0	A0 : B0	validated
LUSC	TCGA.O2.A52V.01A	SPAG16::CUL3	0.15	tier1	In-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.22.4593.01A	SPAG7::CAMTA2	0.61	tier3	Out-of-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.22.4591.01A	SPATA18::EXOC1	0.046	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.NC.A5HH.01A	SPATA2L::FANCA	0.037	tier1	In-frame	A0 : B1	A0 : B1	NA
LUSC	TCGA.37.A5EL.01A	SPC25::NEK11	0.04	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.66.2793.01A	SPEF2::NADKD1	0.22	tier2	CDS-5UTR	A0 : B0	A0 : B0	validated
LUSC	TCGA.22.4613.01A	SPOP::SLC35B1	0.27	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.92.8063.01A	SPP1::THSD4	1.8	tier3	3UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.34.8454.01A	SPSB1::H6PD	0.083	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.43.7658.01A	SRCAP::RP11-195F19.29	0.33	tier1	NA	A0 : B0	A0 : B0	NA
LUSC	TCGA.56.A5DR.01A	SREBF2::RNF214	0.58	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.79.5596.01A	SREK1::ST6GAL1	0.092	tier1	CDS-5UTR	A1 : B0	A0 : B0	NA
LUSC	TCGA.94.7033.01A	SRPK1::CEP57L1	0.18	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.85.8352.01A	SRPK2::LRP5	2.4	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.O2.A5IB.01A	SSBP1::PPP6R3	0.62	tier1	3UTR-CDS	A0 : B1	A0 : B1	NA
LUSC	TCGA.56.8625.01A	ST5::TMEM9B	0.002	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.34.5241.01A	ST6GAL1::TBCCD1	0.51	tier1	5UTR-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.LA.A7SW.01A	ST6GALNAC3::AK5	0.006	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.94.8035.01A	STAG1::NCK1	0.042	tier1	CDS-5UTR	A1 : B0	A0 : B0	NA
LUSC	TCGA.39.5040.01A	STAU1::PLCE1	0.29	tier1	5UTR-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.66.2766.01A	STIM1::VHL	1.9	tier1	In-frame	A1 : B0	A0 : B0	non-validated
LUSC	TCGA.22.A5C4.01A	STIM2::GATAD2A	0.088	tier1	CDS-5UTR	A1 : B0	A0 : B0	NA
LUSC	TCGA.77.8148.01A	STIP1::PC	0.12	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.43.7658.01A	STRBP::DENND1A	0.092	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.NC.A5HL.01A	STRBP::DENND1A	0.092	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.94.8491.01A	STRN::HEATR5B	0.58	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.66.2758.01A	STX12::TMEM222	0.61	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.85.8287.01A	STX12::WDTC1	0.53	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.77.8138.01A	STX17::NR4A3	1.7	tier3	CDS-5UTR	A1 : B0	A0 : B0	NA
LUSC	TCGA.66.2742.01A	STX5::WDR74	0.032	tier2	5UTR-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.34.A5IX.01A	STX6::TNR	0.27	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.66.2770.01A	SUN1::ICA1	0.032	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.77.8007.01A	SUPT5H::ACVRL1	0.16	tier3	3UTR-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.66.2766.01A	SUV420H1::SLITRK4	0.042	tier4	5UTR-5UTR	A0 : B0	A0 : B0	non-validated
LUSC	TCGA.66.2759.01A	SYMPK::ZNF573	1.3	tier1	Out-of-frame	A0 : B0	A0 : B0	validated
LUSC	TCGA.66.2783.01A	SYNGR2::MSI2	0.13	tier2	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.43.A475.01A	SYNRG::ROBO1	0.63	tier2	Out-of-frame	A1 : B1	A0 : B0	NA
LUSC	TCGA.39.5011.01A	SYPL1::TMEM168	1.1	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.98.A53A.01A	TAF12::TPRG1	0.006	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.43.A475.01A	TAF8::SLC22A16	1.6	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.43.2581.01A	TANC2::PRKCA	0.68	tier4	In-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.56.6545.01A	TANK::MNAT1	0.058	tier1	Out-of-frame	A1 : B0	A1 : B0	NA
LUSC	TCGA.56.6545.01A	TANK::SLC38A6	0.47	tier1	In-frame	A1 : B0	A1 : B0	NA
LUSC	TCGA.77.8148.01A	TAOK1::NF1	0.17	tier3	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.85.6560.01A	TARS2::VPS45	0.94	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.96.7544.01A	TASP1::RALGAPA2	0.73	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.66.2795.01A	TAX1BP3::C17orf85	100.0	tier1	Out-of-frame	A1 : B0	A0 : B0	non-validated
LUSC	TCGA.43.6143.01A	TBC1D1::RAB28	1.3	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.37.5819.01A	TBC1D12::EXOC6	0.19	tier2	Out-of-frame	A0 : B1	A0 : B0	NA
LUSC	TCGA.85.A50M.01A	TBC1D22A::FBLN1	0.4	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.58.8386.01A	TBC1D23::C3orf26	100.0	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.77.A5G3.01A	TBC1D4::KLF12	0.69	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.96.A4JK.01A	TBC1D9B::RNF130	0.49	tier1	In-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.39.5034.01A	TBCD::ASPSCR1	1.1	tier3	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.37.A5EN.01A	TBCE::GGPS1	0.71	tier1	Out-of-frame	A1 : B1	A0 : B0	NA
LUSC	TCGA.77.A5G7.01B	TBCE::GGPS1	0.71	tier3	In-frame	A1 : B1	A0 : B0	NA
LUSC	TCGA.56.8305.01A	TBCK::SLC9B2	0.014	tier2	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.43.5668.01A	TC2N::LPP	0.079	tier2	Out-of-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.98.8022.01A	TECPR1::ZFR	3.9	tier1	5UTR-CDS	A0 : B0	A0 : B0	non-validated
LUSC	TCGA.43.7658.01A	TECR::PKN1	0.037	tier1	In-frame	A0 : B0	A1 : B0	NA
LUSC	TCGA.56.A4ZK.01A	TFDP1::LAMP1	0.23	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.56.A5DR.01A	TFEB::MDFI	0.15	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.39.5019.01A	TFIP11::AMPD1	1.1	tier4	5UTR-CDS	A0 : B0	A0 : B1	NA
LUSC	TCGA.22.5474.01A	TFRC::CPA3	1.1	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.66.2756.01A	THADA::EML4	1.4	tier1	Out-of-frame	A0 : B0	A0 : B0	validated
LUSC	TCGA.63.A5MP.01A	THAP7::NRG1	0.47	tier2	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.85.8479.01A	THRA::PSMD3	0.009	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.63.A5MP.01A	THSD4::WARS	1.0	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.94.8491.01A	TIA1::FAM136A	0.007	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.85.8353.01A	TJAP1::ABCC10	0.049	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.96.A4JK.01A	TJP2::STX17	1.6	tier2	5UTR-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.66.2766.01A	TJP3::LRRC8E	0.4	tier1	5UTR-5UTR	A0 : B0	A0 : B0	non-validated
LUSC	TCGA.46.6025.01A	TLK1::CREG2	0.19	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.94.7943.01A	TLK2::BCAS3	0.2	tier1	Out-of-frame	A1 : B1	A0 : B0	validated
LUSC	TCGA.66.2789.01A	TM9SF4::HM13	0.074	tier1	In-frame	A0 : B0	A0 : B0	non-validated
LUSC	TCGA.39.5019.01A	TMCC1::LSAMP	0.37	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.NC.A5HN.01A	TMCC1::QSOX2	0.97	tier1	In-frame	A0 : B1	A0 : B0	NA
LUSC	TCGA.98.A53C.01A	TMCO3::SPACA7	0.086	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.98.A53A.01A	TMEM104::PCYT2	0.013	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.43.8116.01A	TMEM117::TTC33	0.26	tier3	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.60.2712.01A	TMEM232::ANKRA2	0.75	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.L3.A524.01A	TMEM25::CD3G	3.0	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.22.5491.01A	TMEM30A::FILIP1	0.062	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.22.1005.01A	TMEM45A::LNP1	0.52	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.85.8664.01A	TMEM65::EXT1	0.95	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.66.2758.01A	TMEM87A::PTPRN2	1.8	tier1	Out-of-frame	A1 : B1	A0 : B0	NA
LUSC	TCGA.85.A511.01A	TMEM87B::MERTK	0.21	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.66.2800.01A	TMEM98::GPATCH8	5.2	tier1	In-frame	A0 : B1	A0 : B0	NA
LUSC	TCGA.39.5011.01A	TMSB10::CLCN3	100.0	tier3	NA	A0 : B0	A0 : B0	NA
LUSC	TCGA.56.A4ZK.01A	TMUB1::AGAP3	0.015	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.21.1083.01A	TMX3::METTL4	0.63	tier1	CDS-5UTR	A0 : B0	A0 : B0	non-validated
LUSC	TCGA.56.7730.01A	TNIK::SPATA16	0.52	tier3	CDS-5UTR	A1 : B0	A0 : B0	NA
LUSC	TCGA.43.5670.01A	TNPO2::DNASE2	0.11	tier1	Out-of-frame	A0 : B0	A0 : B0	non-validated
LUSC	TCGA.37.A5EN.01A	TNPO2::HOOK2	0.14	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.56.A4BY.01A	TNRC6C::PHACTR1	0.039	tier2	5UTR-CDS	A0 : B1	A0 : B0	NA
LUSC	TCGA.NC.A5HL.01A	TNS1::TMBIM1	0.31	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.33.AASI.01A	TNS4::CCR7	1.1	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.6A.AB49.01A	TOP1::SLC2A10	0.58	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.77.A5G7.01B	TP63::TPRG1	0.96	tier1	In-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.77.8009.01A	TPCN2::TMEM179B	0.041	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.77.8009.01A	TPD52::RALYL	0.09	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.60.2706.01A	TPX2::EYS	4.8	tier1	In-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.39.5030.01A	TRAF3::BMP3	0.52	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.85.8580.01A	TRAF3IP2::FYN	2.3	tier3	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.85.A4QR.01A	TRAF7::LRRC1	0.12	tier1	In-frame	A0 : B1	A0 : B0	NA
LUSC	TCGA.43.8115.01A	TRAP1::CREBBP	0.25	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.66.2768.01A	TRAPPC8::RNF125	0.38	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.21.1082.01A	TRIM28::ZBTB45	0.86	tier4	Out-of-frame	A1 : B0	A1 : B0	non-validated
LUSC	TCGA.52.7809.01A	TRIM33::CSMD2	1.2	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.60.2706.01A	TRIM65::SRP68	1.1	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.46.3765.01A	TRIO::FBXL7	0.52	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.46.6026.01A	TRIP12::KIF1A	2.1	tier1	5UTR-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.LA.A7SW.01A	TSC2::MAPK8IP3	0.1	tier4	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.85.6175.01A	TSC22D2::ADCY5	0.36	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.63.A5MW.01A	TSPAN9::TTC38	0.4	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.96.A4JK.01A	TSSC1::MYT1L	0.45	tier2	CDS-5UTR	A1 : B0	A0 : B0	NA
LUSC	TCGA.56.7822.01A	TTBK2::UBR1	0.45	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.94.8491.01A	TTC27::BIRC6	0.011	tier3	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.60.2715.01A	TTC27::SPAST	1.8	tier3	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.34.5929.01A	TTC28::EP300	0.33	tier3	Out-of-frame	A1 : B1	A0 : B0	NA
LUSC	TCGA.39.5024.01A	TTC6::MIPOL1	1.5	tier4	NA	A0 : B0	A0 : B0	NA
LUSC	TCGA.66.2753.01A	TTC6::MIPOL1	1.5	tier1	NA	A0 : B0	A0 : B0	NA
LUSC	TCGA.66.2771.01A	TTC6::MIPOL1	1.5	tier1	NA	A0 : B0	A0 : B0	NA
LUSC	TCGA.85.8664.01A	TTC6::MIPOL1	1.5	tier4	In-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.NC.A5HQ.01A	TTC6::MIPOL1	1.5	tier4	NA	A0 : B0	A0 : B0	NA
LUSC	TCGA.XC.AA0X.01A	TTC6::MIPOL1	1.5	tier1	NA	A0 : B0	A0 : B0	NA
LUSC	TCGA.77.8154.01A	TTC7B::RUNX1	0.9	tier2	Out-of-frame	A0 : B1	A0 : B0	NA
LUSC	TCGA.60.2712.01A	TTLL4::MREG	2.8	tier3	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.77.A5G6.01A	TTLL5::RGS6	0.52	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.34.8456.01A	TULP3::GGNBP2	1.1	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.66.2788.01A	TULP4::ESR1	0.06	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.33.AASB.01A	TXNRD1::GLT8D2	0.92	tier1	CDS-5UTR	A1 : B0	A1 : B0	NA
LUSC	TCGA.43.2578.01A	TXNRD1::HCFC2	0.047	tier1	Out-of-frame	A1 : B0	A1 : B0	NA
LUSC	TCGA.98.A53A.01A	TXNRD1::LAMTOR3	0.049	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.85.8353.01A	TYMS::YES1	3.4	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.33.4547.01A	U2AF2::NLRP9	0.39	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.77.8139.01A	UAP1::NOS1AP	1.6	tier1	Out-of-frame	A1 : B1	A1 : B0	NA
LUSC	TCGA.94.8491.01A	UBA1::ELK3	0.53	tier3	3UTR-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.XC.AA0X.01A	UBA6::TMPRSS11D	2.3	tier3	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.O2.A5IB.01A	UBAP1::UNC13B	0.65	tier1	Out-of-frame	A0 : B1	A0 : B0	NA
LUSC	TCGA.77.7138.01A	UBAP2::SLC26A7	0.066	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.37.4130.01A	UBAP2L::EEFSEC	0.32	tier1	Out-of-frame	A1 : B0	A1 : B0	NA
LUSC	TCGA.85.A4QQ.01A	UBE2D2::ARHGAP26	0.27	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.66.2771.01A	UBE2D3::SLC9B1	0.27	tier3	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.21.5787.01A	UBE2E2::FAM179B	0.051	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.L3.A524.01A	UBE2K::LIAS	1.2	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.56.7580.01A	UBE2R2::NFX1	0.055	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.60.2719.01A	UBE2R2::PRSS3	1.7	tier1	Out-of-frame	A0 : B0	A0 : B0	non-validated
LUSC	TCGA.56.A4BW.01A	UBE4B::PDPN	2.1	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.56.7730.01A	UBE4B::PLEKHG5	0.084	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.56.8082.01A	UBE4B::RBP7	0.58	tier3	In-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.66.2756.01A	UBR1::TGM5	0.22	tier1	In-frame	A0 : B0	A0 : B0	validated
LUSC	TCGA.56.8083.01A	UGP2::PLEKHM3	0.31	tier1	In-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.56.5898.01A	UHRF1BP1::OSBPL1A	1.4	tier1	CDS-5UTR	A1 : B0	A0 : B0	NA
LUSC	TCGA.22.5473.01A	UHRF1BP1L::ANKS1B	2.5	tier1	In-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.34.5232.01A	ULK1::FBXW8	0.25	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.94.8491.01A	UNC13D::FBF1	0.05	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.43.2581.01A	UNK::AVIL	0.42	tier2	NA	A0 : B0	A0 : B0	NA
LUSC	TCGA.43.3920.01A	UNK::DPYD	2.2	tier1	Out-of-frame	A1 : B0	A0 : B0	non-validated
LUSC	TCGA.46.6025.01A	UQCC::GDF5	4.0	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.O2.A52N.01A	URGCP::UPP1	1.4	tier1	5UTR-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.LA.A7SW.01A	URM1::C9orf3	1.1	tier2	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.43.A56U.01A	USP10::CDH13	0.27	tier4	NA	A0 : B0	A0 : B0	NA
LUSC	TCGA.77.A5G3.01A	USP25::CAPN3	0.014	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.77.8139.01A	USP3::HERC1	0.031	tier3	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.22.5481.01A	USP32::EPHA1	2.9	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.56.8083.01A	USP34::ZNF2	1.6	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.77.A5GH.01A	USP39::GGCX	0.25	tier3	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.77.6845.01A	USP48::C1orf201	1.6	tier1	CDS-5UTR	A1 : B0	A1 : B0	NA
LUSC	TCGA.85.8070.01A	USP48::MAN1C1	0.22	tier1	In-frame	A0 : B0	A1 : B0	NA
LUSC	TCGA.85.8070.01A	USP48::SEPN1	0.058	tier2	Out-of-frame	A0 : B0	A1 : B0	NA
LUSC	TCGA.96.A4JK.01A	VARS::HSPA1L	0.032	tier4	5UTR-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.43.6770.01A	VCL::SFTPD	0.021	tier1	CDS-5UTR	A1 : B0	A1 : B0	NA
LUSC	TCGA.66.2783.01A	VEZF1::DDX42	2.3	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.60.2706.01A	VPS13B::DPYS	1.1	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.L3.A524.01A	VPS39::TMEM87A	1.8	tier1	Out-of-frame	A0 : B1	A0 : B0	NA
LUSC	TCGA.94.8035.01A	VPS53::GLOD4	0.024	tier3	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.98.A53C.01A	VPS53::GLOD4	0.024	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.56.A4BX.01A	VPS8::NLGN1	1.5	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.66.2781.01A	VPS8::NPHP3	0.27	tier3	In-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.43.3920.01A	VRK2::EIF2C3	1.1	tier2	Out-of-frame	A1 : B0	A1 : B0	non-validated
LUSC	TCGA.60.2725.01A	WARS2::PHGDH	0.32	tier1	In-frame	A0 : B1	A0 : B1	NA
LUSC	TCGA.22.4604.01A	WASF2::AHDC1	0.031	tier2	NA	A0 : B0	A0 : B0	NA
LUSC	TCGA.56.8082.01A	WASF2::AHDC1	0.031	tier1	5UTR-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.66.2758.01A	WASF2::AHDC1	0.031	tier1	NA	A0 : B0	A0 : B0	NA
LUSC	TCGA.66.2800.01A	WASF2::AHDC1	0.031	tier1	5UTR-3UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.85.8580.01A	WASF2::AHDC1	0.031	tier1	5UTR-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.94.8035.01A	WASF2::AHDC1	0.031	tier4	NA	A0 : B0	A0 : B0	NA
LUSC	TCGA.66.2765.01A	WASF2::FAM65B	0.091	tier1	CDS-5UTR	A1 : B0	A0 : B0	NA
LUSC	TCGA.66.2759.01A	WASF2::FGR	0.55	tier1	5UTR-5UTR	A0 : B0	A0 : B0	non-validated
LUSC	TCGA.39.5035.01A	WDR35::PUM2	0.12	tier2	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.90.6837.01A	WDR45L::B3GNTL1	0.003	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.60.2711.01A	WDR47::RP11-389E17.1	1.9	tier1	CDS-5UTR	A1 : B0	A0 : B0	non-validated
LUSC	TCGA.96.A4JK.01A	WDR81::CYB5D1	0.26	tier2	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.NC.A5HJ.01A	WDSUB1::BAZ2B	0.013	tier3	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.63.A5MB.01A	WDYHV1::ATAD2	1.0	tier2	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.60.2716.01A	WHSC1L1::C15orf55	0.23	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.63.A5MP.01A	WHSC1L1::DDHD2	0.27	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.77.8143.01A	WHSC1L1::TACC1	0.44	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.98.A53I.01A	WNK1::DUSP16	1.4	tier1	In-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.22.5483.01A	WNK2::SECISBP2	0.079	tier2	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.39.5036.01A	WNT5B::NINJ2	1.2	tier1	NA	A0 : B0	A0 : B0	NA
LUSC	TCGA.94.7557.01A	WWP2::TMCO7	2.7	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.96.A4JK.01A	XPA::CORO2A	0.28	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.52.7810.01A	XRN2::TMEM40	3.4	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.56.A4BY.01A	YEATS2::ATP11B	1.7	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.66.2782.01A	YTHDC1::ADAMTS3	0.37	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.37.5819.01A	YTHDC1::SULT1B1	1.1	tier1	NA	A0 : B0	A0 : B0	NA
LUSC	TCGA.68.8250.01A	ZBTB20::WDR52	1.4	tier1	5UTR-CDS	A0 : B0	A0 : B0	non-validated
LUSC	TCGA.L3.A524.01A	ZBTB25::TPRG1	1.4	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.56.7823.01B	ZBTB38::ACPL2	1.1	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.77.7142.01A	ZBTB38::ACPL2	1.1	tier1	5UTR-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.66.2793.01A	ZC3H3::PYCRL	0.089	tier1	In-frame	A0 : B0	A0 : B0	non-validated
LUSC	TCGA.85.8580.01A	ZC3H3::SCRIB	0.05	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.22.5489.01A	ZCCHC7::LRRC19	0.096	tier2	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.18.3419.01A	ZCCHC7::UBAP1	0.94	tier2	CDS-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.39.5011.01A	ZCCHC7::ZBTB7C	0.39	tier2	NA	A0 : B0	A0 : B0	NA
LUSC	TCGA.39.5034.01A	ZFAND3::AL353597.1	0.46	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.43.7657.01A	ZFAND3::UBQLN1	0.49	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.96.A4JL.01A	ZFHX3::WWP2	0.21	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
LUSC	TCGA.34.5236.01A	ZFHX4::VRK1	0.87	tier1	NA	A0 : B0	A0 : B0	NA
LUSC	TCGA.98.8023.01A	ZHX2::LELP1	100.0	tier1	5UTR-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.85.8048.01A	ZMAT5::HIRA	0.15	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.66.2744.01A	ZMYM2::DMRT2	0.9	tier1	CDS-5UTR	A0 : B0	A0 : B0	validated
LUSC	TCGA.18.3415.01A	ZNF189::BAAT	4.6	tier2	CDS-5UTR	A1 : B0	A0 : B0	non-validated
LUSC	TCGA.J1.A4AH.01A	ZNF189::BAAT	4.6	tier3	CDS-5UTR	A1 : B0	A0 : B0	NA
LUSC	TCGA.60.2712.01A	ZNF200::COLEC12	1.3	tier1	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.60.2706.01A	ZNF331::NLRP4	0.66	tier2	5UTR-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.34.5241.01A	ZNF430::GABRB1	3.6	tier3	Out-of-frame	A1 : B0	A1 : B0	NA
LUSC	TCGA.90.7767.01A	ZNF480::CKM	1.9	tier3	In-frame	A1 : B0	A0 : B0	non-validated
LUSC	TCGA.43.5670.01A	ZNF490::FARSA	0.08	tier1	In-frame	A0 : B1	A0 : B1	non-validated
LUSC	TCGA.85.A4JB.01A	ZNF498::SPATS1	0.06	tier4	In-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.43.2578.01A	ZNF503::NCRNA00245	0.84	tier3	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.43.5670.01A	ZNF532::MALT1	0.17	tier1	Out-of-frame	A0 : B0	A0 : B0	validated
LUSC	TCGA.60.2706.01A	ZNF557::C19orf75	1.3	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.94.A4VJ.01A	ZNF562::RFX2	0.84	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.22.1005.01A	ZNF571::CATSPERG	2.1	tier2	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.43.7657.01A	ZNF599::SCN1B	1.9	tier2	In-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.94.7943.01A	ZNF653::CNN1	0.44	tier2	Out-of-frame	A0 : B1	A0 : B0	non-validated
LUSC	TCGA.39.5019.01A	ZNF653::NFIC	0.055	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.37.A5EN.01A	ZNF653::PDE4A	0.003	tier2	NA	A0 : B0	A0 : B0	NA
LUSC	TCGA.60.2706.01A	ZNF704::PAG1	0.19	tier4	CDS-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.60.2706.01A	ZNF714::C19orf75	1.5	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.O2.A5IB.01A	ZNF75D::UBR2	0.45	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
LUSC	TCGA.22.5478.01A	ZNF8::SSBP4	0.13	tier2	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.94.8491.01A	ZNF814::ZSCAN18	0.19	tier3	CDS-5UTR	A1 : B0	A0 : B0	NA
LUSC	TCGA.22.1000.01A	ZNF836::IGSF23	1.4	tier3	Out-of-frame	A1 : B0	A0 : B0	NA
LUSC	TCGA.43.6143.01A	ZNRF3::MED15	0.006	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.85.8354.01A	ZPBP::C7orf10	100.0	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.21.5783.01A	ZSCAN5A::GALP	0.77	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
LUSC	TCGA.60.2703.01A	ZSWIM4::CCDC130	0.073	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
LUSC	TCGA.46.6026.01A	ZSWIM4::SLC1A6	0.28	tier1	Out-of-frame	A0 : B0	A0 : B0	NA